Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHD1LQ86WJ1 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHD1LQ86WJ1 INTS4P2-202ENST00000614726 2019 ntBASIC18.81■□□□□ 0.6
CHD1LQ86WJ1 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHD1LQ86WJ1 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CHD1LQ86WJ1 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHD1LQ86WJ1 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHD1LQ86WJ1 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHD1LQ86WJ1 BX640514.1-201ENST00000583223 1918 ntBASIC18.8■□□□□ 0.6
CHD1LQ86WJ1 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHD1LQ86WJ1 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHD1LQ86WJ1 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHD1LQ86WJ1 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHD1LQ86WJ1 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
CHD1LQ86WJ1 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHD1LQ86WJ1 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHD1LQ86WJ1 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHD1LQ86WJ1 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHD1LQ86WJ1 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CHD1LQ86WJ1 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC18.8■□□□□ 0.6
CHD1LQ86WJ1 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC18.8■□□□□ 0.6
CHD1LQ86WJ1 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.8■□□□□ 0.6
CHD1LQ86WJ1 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18.8■□□□□ 0.6
CHD1LQ86WJ1 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.8■□□□□ 0.6
CHD1LQ86WJ1 RNA5SP421-201ENST00000516864 134 ntBASIC18.8■□□□□ 0.6
CHD1LQ86WJ1 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.8■□□□□ 0.6
CHD1LQ86WJ1 AC055876.2-201ENST00000531834 546 ntBASIC18.8■□□□□ 0.6
CHD1LQ86WJ1 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.8■□□□□ 0.6
CHD1LQ86WJ1 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.8■□□□□ 0.6
CHD1LQ86WJ1 AC120045.2-201ENST00000567334 178 ntBASIC18.8■□□□□ 0.6
CHD1LQ86WJ1 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHD1LQ86WJ1 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC18.8■□□□□ 0.6
CHD1LQ86WJ1 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.8■□□□□ 0.6
CHD1LQ86WJ1 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHD1LQ86WJ1 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHD1LQ86WJ1 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC18.8■□□□□ 0.6
CHD1LQ86WJ1 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CHD1LQ86WJ1 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHD1LQ86WJ1 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHD1LQ86WJ1 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC18.8■□□□□ 0.6
CHD1LQ86WJ1 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CHD1LQ86WJ1 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHD1LQ86WJ1 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.8■□□□□ 0.6
CHD1LQ86WJ1 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHD1LQ86WJ1 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CHD1LQ86WJ1 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC18.79■□□□□ 0.6
CHD1LQ86WJ1 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHD1LQ86WJ1 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC18.79■□□□□ 0.6
CHD1LQ86WJ1 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.79■□□□□ 0.6
CHD1LQ86WJ1 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHD1LQ86WJ1 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC18.79■□□□□ 0.6
CHD1LQ86WJ1 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CHD1LQ86WJ1 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHD1LQ86WJ1 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC18.79■□□□□ 0.6
CHD1LQ86WJ1 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC18.79■□□□□ 0.6
CHD1LQ86WJ1 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHD1LQ86WJ1 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHD1LQ86WJ1 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHD1LQ86WJ1 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.79■□□□□ 0.6
CHD1LQ86WJ1 TEX30-203ENST00000376022 828 ntTSL 2 BASIC18.79■□□□□ 0.6
CHD1LQ86WJ1 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHD1LQ86WJ1 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.79■□□□□ 0.6
CHD1LQ86WJ1 INGX-202ENST00000489074 768 ntBASIC18.79■□□□□ 0.6
CHD1LQ86WJ1 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC18.79■□□□□ 0.6
CHD1LQ86WJ1 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.79■□□□□ 0.6
CHD1LQ86WJ1 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.79■□□□□ 0.6
CHD1LQ86WJ1 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC18.79■□□□□ 0.6
CHD1LQ86WJ1 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHD1LQ86WJ1 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CHD1LQ86WJ1 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHD1LQ86WJ1 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHD1LQ86WJ1 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CHD1LQ86WJ1 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHD1LQ86WJ1 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHD1LQ86WJ1 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CHD1LQ86WJ1 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHD1LQ86WJ1 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CHD1LQ86WJ1 AC018665.1-201ENST00000622927 1362 ntBASIC18.79■□□□□ 0.6
CHD1LQ86WJ1 MPI-203ENST00000535694 1523 ntTSL 2 BASIC18.79■□□□□ 0.6
CHD1LQ86WJ1 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHD1LQ86WJ1 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHD1LQ86WJ1 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHD1LQ86WJ1 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHD1LQ86WJ1 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHD1LQ86WJ1 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CHD1LQ86WJ1 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHD1LQ86WJ1 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC18.78■□□□□ 0.6
CHD1LQ86WJ1 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC18.78■□□□□ 0.6
CHD1LQ86WJ1 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHD1LQ86WJ1 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHD1LQ86WJ1 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHD1LQ86WJ1 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHD1LQ86WJ1 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CHD1LQ86WJ1 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
CHD1LQ86WJ1 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CHD1LQ86WJ1 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CHD1LQ86WJ1 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHD1LQ86WJ1 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHD1LQ86WJ1 AC098850.1-201ENST00000419919 790 ntBASIC18.78■□□□□ 0.6
CHD1LQ86WJ1 AC134915.1-201ENST00000426461 574 ntBASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms