Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CSMD2Q7Z408 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CSMD2Q7Z408 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC12.48□□□□□ -0.41
CSMD2Q7Z408 AC018846.1-201ENST00000568231 183 ntBASIC12.48□□□□□ -0.41
CSMD2Q7Z408 MIR6720-201ENST00000611664 98 ntBASIC12.48□□□□□ -0.41
CSMD2Q7Z408 AC011462.4-201ENST00000616866 449 ntBASIC12.48□□□□□ -0.41
CSMD2Q7Z408 AC092299.1-201ENST00000632679 757 ntBASIC12.48□□□□□ -0.41
CSMD2Q7Z408 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CSMD2Q7Z408 AC018629.1-201ENST00000623381 1736 ntBASIC12.48□□□□□ -0.41
CSMD2Q7Z408 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
CSMD2Q7Z408 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CSMD2Q7Z408 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC12.48□□□□□ -0.41
CSMD2Q7Z408 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CSMD2Q7Z408 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CSMD2Q7Z408 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
CSMD2Q7Z408 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CSMD2Q7Z408 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CSMD2Q7Z408 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 RNA5SP359-201ENST00000364838 113 ntBASIC12.47□□□□□ -0.41
CSMD2Q7Z408 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 AC004066.1-201ENST00000502488 802 ntBASIC12.47□□□□□ -0.41
CSMD2Q7Z408 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 AC006504.5-208ENST00000588784 2401 ntBASIC12.47□□□□□ -0.41
CSMD2Q7Z408 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 MIR4472-1-201ENST00000584349 80 ntBASIC12.47□□□□□ -0.41
CSMD2Q7Z408 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 AC006483.2-201ENST00000609813 515 ntBASIC12.47□□□□□ -0.41
CSMD2Q7Z408 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
CSMD2Q7Z408 NKILA-202ENST00000614771 2598 ntBASIC12.46□□□□□ -0.41
CSMD2Q7Z408 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CSMD2Q7Z408 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC12.46□□□□□ -0.41
CSMD2Q7Z408 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC12.46□□□□□ -0.41
CSMD2Q7Z408 SURF4-203ENST00000371991 715 ntTSL 3 BASIC12.46□□□□□ -0.41
CSMD2Q7Z408 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.46□□□□□ -0.41
CSMD2Q7Z408 RN7SKP109-201ENST00000410592 316 ntBASIC12.46□□□□□ -0.41
CSMD2Q7Z408 MED11-202ENST00000573708 802 ntTSL 2 BASIC12.46□□□□□ -0.41
CSMD2Q7Z408 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC12.46□□□□□ -0.41
CSMD2Q7Z408 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CSMD2Q7Z408 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CSMD2Q7Z408 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CSMD2Q7Z408 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
CSMD2Q7Z408 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CSMD2Q7Z408 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC12.46□□□□□ -0.41
CSMD2Q7Z408 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC12.46□□□□□ -0.41
CSMD2Q7Z408 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.46□□□□□ -0.41
CSMD2Q7Z408 API5-208ENST00000531273 1868 ntTSL 2 BASIC12.46□□□□□ -0.41
CSMD2Q7Z408 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CSMD2Q7Z408 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CSMD2Q7Z408 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CSMD2Q7Z408 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC12.46□□□□□ -0.41
CSMD2Q7Z408 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC12.46□□□□□ -0.41
CSMD2Q7Z408 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC12.46□□□□□ -0.41
CSMD2Q7Z408 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.46□□□□□ -0.41
CSMD2Q7Z408 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.46□□□□□ -0.41
CSMD2Q7Z408 AP005264.6-204ENST00000588436 719 ntBASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms