Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 AL451007.2-201ENST00000632004 563 ntBASIC17.59■□□□□ 0.41
USP50Q70EL3 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
USP50Q70EL3 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP50Q70EL3 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
USP50Q70EL3 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
USP50Q70EL3 AC012313.1-201ENST00000593393 3059 ntBASIC17.58■□□□□ 0.41
USP50Q70EL3 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
USP50Q70EL3 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
USP50Q70EL3 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
USP50Q70EL3 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
USP50Q70EL3 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.58■□□□□ 0.41
USP50Q70EL3 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
USP50Q70EL3 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
USP50Q70EL3 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
USP50Q70EL3 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
USP50Q70EL3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
USP50Q70EL3 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
USP50Q70EL3 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.58■□□□□ 0.41
USP50Q70EL3 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
USP50Q70EL3 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP50Q70EL3 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP50Q70EL3 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.58■□□□□ 0.4
USP50Q70EL3 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP50Q70EL3 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP50Q70EL3 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC17.58■□□□□ 0.4
USP50Q70EL3 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
USP50Q70EL3 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC17.58■□□□□ 0.4
USP50Q70EL3 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
USP50Q70EL3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.58■□□□□ 0.4
USP50Q70EL3 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP50Q70EL3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
USP50Q70EL3 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP50Q70EL3 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP50Q70EL3 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP50Q70EL3 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP50Q70EL3 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
USP50Q70EL3 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP50Q70EL3 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP50Q70EL3 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
USP50Q70EL3 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
USP50Q70EL3 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP50Q70EL3 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
USP50Q70EL3 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
USP50Q70EL3 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
USP50Q70EL3 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
USP50Q70EL3 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP50Q70EL3 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP50Q70EL3 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
USP50Q70EL3 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.57■□□□□ 0.4
USP50Q70EL3 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.57■□□□□ 0.4
USP50Q70EL3 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP50Q70EL3 OR6D1P-203ENST00000641209 4860 ntBASIC17.57■□□□□ 0.4
USP50Q70EL3 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP50Q70EL3 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
USP50Q70EL3 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP50Q70EL3 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC17.57■□□□□ 0.4
USP50Q70EL3 AQP7P5-201ENST00000428759 1049 ntBASIC17.57■□□□□ 0.4
USP50Q70EL3 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC17.57■□□□□ 0.4
USP50Q70EL3 AQP7P4-201ENST00000447083 1042 ntBASIC17.57■□□□□ 0.4
USP50Q70EL3 AQP7P2-201ENST00000453967 1041 ntBASIC17.57■□□□□ 0.4
USP50Q70EL3 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
USP50Q70EL3 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC17.57■□□□□ 0.4
USP50Q70EL3 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC17.57■□□□□ 0.4
USP50Q70EL3 RNA5SP417-201ENST00000516459 108 ntBASIC17.57■□□□□ 0.4
USP50Q70EL3 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
USP50Q70EL3 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC17.57■□□□□ 0.4
USP50Q70EL3 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
USP50Q70EL3 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC17.57■□□□□ 0.4
USP50Q70EL3 AC138701.2-201ENST00000553634 226 ntBASIC17.57■□□□□ 0.4
USP50Q70EL3 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC17.57■□□□□ 0.4
USP50Q70EL3 AQP7P3-201ENST00000624547 1041 ntBASIC17.57■□□□□ 0.4
USP50Q70EL3 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP50Q70EL3 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP50Q70EL3 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC17.57■□□□□ 0.4
USP50Q70EL3 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP50Q70EL3 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP50Q70EL3 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.57■□□□□ 0.4
USP50Q70EL3 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP50Q70EL3 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP50Q70EL3 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP50Q70EL3 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP50Q70EL3 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP50Q70EL3 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP50Q70EL3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.56■□□□□ 0.4
USP50Q70EL3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
USP50Q70EL3 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.56■□□□□ 0.4
USP50Q70EL3 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP50Q70EL3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP50Q70EL3 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP50Q70EL3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP50Q70EL3 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP50Q70EL3 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC17.56■□□□□ 0.4
USP50Q70EL3 AC092127.1-201ENST00000567093 3455 ntBASIC17.56■□□□□ 0.4
USP50Q70EL3 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.56■□□□□ 0.4
USP50Q70EL3 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP50Q70EL3 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP50Q70EL3 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
USP50Q70EL3 STK16-203ENST00000409516 895 ntTSL 2 BASIC17.56■□□□□ 0.4
USP50Q70EL3 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
USP50Q70EL3 GUSBP10-201ENST00000417412 665 ntBASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms