Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL54Q6P161 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC11.59□□□□□ -0.55
MRPL54Q6P161 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC11.59□□□□□ -0.55
MRPL54Q6P161 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL54Q6P161 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL54Q6P161 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL54Q6P161 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL54Q6P161 SF1-209ENST00000433274 2317 ntTSL 2 BASIC11.59□□□□□ -0.55
MRPL54Q6P161 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL54Q6P161 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL54Q6P161 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC11.59□□□□□ -0.55
MRPL54Q6P161 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL54Q6P161 AP000845.1-201ENST00000581677 2131 ntBASIC11.59□□□□□ -0.55
MRPL54Q6P161 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
MRPL54Q6P161 AC118758.2-201ENST00000614242 2813 ntBASIC11.59□□□□□ -0.55
MRPL54Q6P161 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL54Q6P161 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL54Q6P161 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
MRPL54Q6P161 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
MRPL54Q6P161 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL54Q6P161 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL54Q6P161 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL54Q6P161 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC11.58□□□□□ -0.56
MRPL54Q6P161 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
MRPL54Q6P161 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL54Q6P161 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC11.58□□□□□ -0.56
MRPL54Q6P161 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
MRPL54Q6P161 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL54Q6P161 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL54Q6P161 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
MRPL54Q6P161 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL54Q6P161 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL54Q6P161 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
MRPL54Q6P161 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL54Q6P161 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL54Q6P161 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC11.58□□□□□ -0.56
MRPL54Q6P161 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL54Q6P161 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC11.58□□□□□ -0.56
MRPL54Q6P161 RPL5P21-201ENST00000404620 815 ntBASIC11.58□□□□□ -0.56
MRPL54Q6P161 HMGA1P7-201ENST00000406908 502 ntBASIC11.58□□□□□ -0.56
MRPL54Q6P161 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL54Q6P161 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL54Q6P161 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC11.58□□□□□ -0.56
MRPL54Q6P161 BET1L-206ENST00000486280 665 ntTSL 3 BASIC11.58□□□□□ -0.56
MRPL54Q6P161 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC11.58□□□□□ -0.56
MRPL54Q6P161 AC104819.1-201ENST00000504587 486 ntBASIC11.58□□□□□ -0.56
MRPL54Q6P161 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC11.58□□□□□ -0.56
MRPL54Q6P161 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC11.58□□□□□ -0.56
MRPL54Q6P161 AC002347.1-201ENST00000569543 541 ntBASIC11.58□□□□□ -0.56
MRPL54Q6P161 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC11.58□□□□□ -0.56
MRPL54Q6P161 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
MRPL54Q6P161 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL54Q6P161 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC11.58□□□□□ -0.56
MRPL54Q6P161 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL54Q6P161 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
MRPL54Q6P161 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
MRPL54Q6P161 AC073508.3-201ENST00000619697 1419 ntBASIC11.58□□□□□ -0.56
MRPL54Q6P161 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL54Q6P161 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
MRPL54Q6P161 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL54Q6P161 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL54Q6P161 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
MRPL54Q6P161 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL54Q6P161 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC11.58□□□□□ -0.56
MRPL54Q6P161 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL54Q6P161 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
MRPL54Q6P161 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
MRPL54Q6P161 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL54Q6P161 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL54Q6P161 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
MRPL54Q6P161 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC11.57□□□□□ -0.56
MRPL54Q6P161 CES1P1-201ENST00000421606 1704 ntBASIC11.57□□□□□ -0.56
MRPL54Q6P161 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL54Q6P161 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
MRPL54Q6P161 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL54Q6P161 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL54Q6P161 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL54Q6P161 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL54Q6P161 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL54Q6P161 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL54Q6P161 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL54Q6P161 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC11.57□□□□□ -0.56
MRPL54Q6P161 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC11.57□□□□□ -0.56
MRPL54Q6P161 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
MRPL54Q6P161 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL54Q6P161 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL54Q6P161 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC11.57□□□□□ -0.56
MRPL54Q6P161 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
MRPL54Q6P161 AC073439.1-201ENST00000624121 1774 ntBASIC11.57□□□□□ -0.56
MRPL54Q6P161 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL54Q6P161 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL54Q6P161 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL54Q6P161 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC11.57□□□□□ -0.56
MRPL54Q6P161 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC11.57□□□□□ -0.56
MRPL54Q6P161 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC11.57□□□□□ -0.56
MRPL54Q6P161 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC11.57□□□□□ -0.56
MRPL54Q6P161 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL54Q6P161 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL54Q6P161 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
MRPL54Q6P161 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC11.57□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms