Protein–RNA interactions for Protein: Q5VXM1

CDCP2, CUB domain-containing protein 2, humanhuman

Predictions only

Length 449 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP2Q5VXM1 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CDCP2Q5VXM1 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDCP2Q5VXM1 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDCP2Q5VXM1 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDCP2Q5VXM1 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDCP2Q5VXM1 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.36□□□□□ -0.11
CDCP2Q5VXM1 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDCP2Q5VXM1 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDCP2Q5VXM1 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CDCP2Q5VXM1 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDCP2Q5VXM1 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.36□□□□□ -0.11
CDCP2Q5VXM1 VDAC1P1-201ENST00000439229 848 ntBASIC14.36□□□□□ -0.11
CDCP2Q5VXM1 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC14.36□□□□□ -0.11
CDCP2Q5VXM1 AC104784.1-201ENST00000473096 294 ntBASIC14.36□□□□□ -0.11
CDCP2Q5VXM1 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC14.36□□□□□ -0.11
CDCP2Q5VXM1 AC019193.1-201ENST00000506678 823 ntBASIC14.36□□□□□ -0.11
CDCP2Q5VXM1 AC116345.2-201ENST00000512837 523 ntBASIC14.36□□□□□ -0.11
CDCP2Q5VXM1 AC009779.1-201ENST00000551138 283 ntBASIC14.36□□□□□ -0.11
CDCP2Q5VXM1 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.36□□□□□ -0.11
CDCP2Q5VXM1 AC242376.1-201ENST00000559033 726 ntBASIC14.36□□□□□ -0.11
CDCP2Q5VXM1 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.36□□□□□ -0.11
CDCP2Q5VXM1 RN7SL555P-201ENST00000584742 339 ntBASIC14.36□□□□□ -0.11
CDCP2Q5VXM1 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDCP2Q5VXM1 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.36□□□□□ -0.11
CDCP2Q5VXM1 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC14.36□□□□□ -0.11
CDCP2Q5VXM1 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CDCP2Q5VXM1 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDCP2Q5VXM1 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDCP2Q5VXM1 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDCP2Q5VXM1 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
CDCP2Q5VXM1 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDCP2Q5VXM1 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.36□□□□□ -0.11
CDCP2Q5VXM1 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDCP2Q5VXM1 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDCP2Q5VXM1 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.36□□□□□ -0.11
CDCP2Q5VXM1 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDCP2Q5VXM1 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDCP2Q5VXM1 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDCP2Q5VXM1 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.36□□□□□ -0.11
CDCP2Q5VXM1 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDCP2Q5VXM1 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.36□□□□□ -0.11
CDCP2Q5VXM1 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 PCDHA1-201ENST00000378133 2726 ntBASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 AC026316.1-201ENST00000398900 414 ntBASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 RTN3P1-201ENST00000536295 711 ntBASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 AC012044.1-201ENST00000603431 297 ntBASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 AP003419.4-201ENST00000616071 517 ntBASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 NAP1L6-202ENST00000641404 1222 ntBASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 INE2-201ENST00000630399 1874 ntBASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 AC009093.2-202ENST00000620513 2079 ntBASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDCP2Q5VXM1 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms