Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TTC39BQ5VTQ0 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.93■□□□□ 0.14
TTC39BQ5VTQ0 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.93■□□□□ 0.14
TTC39BQ5VTQ0 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.93■□□□□ 0.14
TTC39BQ5VTQ0 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.93■□□□□ 0.14
TTC39BQ5VTQ0 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TTC39BQ5VTQ0 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TTC39BQ5VTQ0 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.93■□□□□ 0.14
TTC39BQ5VTQ0 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TTC39BQ5VTQ0 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
TTC39BQ5VTQ0 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.93■□□□□ 0.14
TTC39BQ5VTQ0 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
TTC39BQ5VTQ0 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TTC39BQ5VTQ0 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TTC39BQ5VTQ0 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TTC39BQ5VTQ0 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.92■□□□□ 0.14
TTC39BQ5VTQ0 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.92■□□□□ 0.14
TTC39BQ5VTQ0 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TTC39BQ5VTQ0 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TTC39BQ5VTQ0 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.92■□□□□ 0.14
TTC39BQ5VTQ0 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.92■□□□□ 0.14
TTC39BQ5VTQ0 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
TTC39BQ5VTQ0 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.92■□□□□ 0.14
TTC39BQ5VTQ0 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.92■□□□□ 0.14
TTC39BQ5VTQ0 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TTC39BQ5VTQ0 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TTC39BQ5VTQ0 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TTC39BQ5VTQ0 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
TTC39BQ5VTQ0 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.92■□□□□ 0.14
TTC39BQ5VTQ0 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.92■□□□□ 0.14
TTC39BQ5VTQ0 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.92■□□□□ 0.14
TTC39BQ5VTQ0 ACTG1P3-201ENST00000431775 1114 ntBASIC15.92■□□□□ 0.14
TTC39BQ5VTQ0 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.92■□□□□ 0.14
TTC39BQ5VTQ0 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.92■□□□□ 0.14
TTC39BQ5VTQ0 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.92■□□□□ 0.14
TTC39BQ5VTQ0 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TTC39BQ5VTQ0 AP001063.1-201ENST00000568332 529 ntBASIC15.92■□□□□ 0.14
TTC39BQ5VTQ0 AC132938.2-201ENST00000579188 680 ntBASIC15.92■□□□□ 0.14
TTC39BQ5VTQ0 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.92■□□□□ 0.14
TTC39BQ5VTQ0 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.92■□□□□ 0.14
TTC39BQ5VTQ0 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.92■□□□□ 0.14
TTC39BQ5VTQ0 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.92■□□□□ 0.14
TTC39BQ5VTQ0 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.92■□□□□ 0.14
TTC39BQ5VTQ0 AL591163.1-201ENST00000641757 987 ntBASIC15.92■□□□□ 0.14
TTC39BQ5VTQ0 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.92■□□□□ 0.14
TTC39BQ5VTQ0 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
TTC39BQ5VTQ0 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.92■□□□□ 0.14
TTC39BQ5VTQ0 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TTC39BQ5VTQ0 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
TTC39BQ5VTQ0 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TTC39BQ5VTQ0 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
TTC39BQ5VTQ0 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
TTC39BQ5VTQ0 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TTC39BQ5VTQ0 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TTC39BQ5VTQ0 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
TTC39BQ5VTQ0 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TTC39BQ5VTQ0 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TTC39BQ5VTQ0 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TTC39BQ5VTQ0 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TTC39BQ5VTQ0 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TTC39BQ5VTQ0 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TTC39BQ5VTQ0 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TTC39BQ5VTQ0 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TTC39BQ5VTQ0 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TTC39BQ5VTQ0 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TTC39BQ5VTQ0 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TTC39BQ5VTQ0 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TTC39BQ5VTQ0 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TTC39BQ5VTQ0 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TTC39BQ5VTQ0 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TTC39BQ5VTQ0 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TTC39BQ5VTQ0 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
TTC39BQ5VTQ0 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
TTC39BQ5VTQ0 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.91■□□□□ 0.14
TTC39BQ5VTQ0 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TTC39BQ5VTQ0 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
TTC39BQ5VTQ0 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TTC39BQ5VTQ0 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.91■□□□□ 0.14
TTC39BQ5VTQ0 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.91■□□□□ 0.14
TTC39BQ5VTQ0 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.91■□□□□ 0.14
TTC39BQ5VTQ0 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.91■□□□□ 0.14
TTC39BQ5VTQ0 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TTC39BQ5VTQ0 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.91■□□□□ 0.14
TTC39BQ5VTQ0 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.91■□□□□ 0.14
TTC39BQ5VTQ0 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.91■□□□□ 0.14
TTC39BQ5VTQ0 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TTC39BQ5VTQ0 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.91■□□□□ 0.14
TTC39BQ5VTQ0 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.91■□□□□ 0.14
TTC39BQ5VTQ0 AL138799.1-201ENST00000448213 1675 ntBASIC15.91■□□□□ 0.14
TTC39BQ5VTQ0 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TTC39BQ5VTQ0 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.91■□□□□ 0.14
TTC39BQ5VTQ0 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TTC39BQ5VTQ0 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TTC39BQ5VTQ0 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TTC39BQ5VTQ0 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TTC39BQ5VTQ0 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TTC39BQ5VTQ0 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TTC39BQ5VTQ0 AL161772.1-201ENST00000610494 4412 ntBASIC15.91■□□□□ 0.14
TTC39BQ5VTQ0 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.9■□□□□ 0.14
TTC39BQ5VTQ0 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms