Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 AC018892.3-201ENST00000623986 2499 ntBASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 AC092580.3-201ENST00000430932 139 ntBASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 ZNF890P-202ENST00000530367 1156 ntBASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 AL033527.5-202ENST00000641632 1098 ntBASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 AC067750.1-201ENST00000608826 6545 ntBASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 AC087499.5-201ENST00000452760 1342 ntBASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 TREML5P-201ENST00000421694 576 ntBASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 MIR4313-201ENST00000580760 101 ntBASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 AC093512.1-201ENST00000617969 520 ntBASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 AL590560.3-201ENST00000623350 461 ntBASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 BX640514.1-201ENST00000583223 1918 ntBASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.31□□□□□ -0.28
ATPAF1Q5TC12 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms