Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.07■□□□□ 0.32
HERC4Q5GLZ8 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HERC4Q5GLZ8 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HERC4Q5GLZ8 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.07■□□□□ 0.32
HERC4Q5GLZ8 ELK1P1-201ENST00000485699 580 ntBASIC17.07■□□□□ 0.32
HERC4Q5GLZ8 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.07■□□□□ 0.32
HERC4Q5GLZ8 AC026410.3-201ENST00000514280 936 ntBASIC17.07■□□□□ 0.32
HERC4Q5GLZ8 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.07■□□□□ 0.32
HERC4Q5GLZ8 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.07■□□□□ 0.32
HERC4Q5GLZ8 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.07■□□□□ 0.32
HERC4Q5GLZ8 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.07■□□□□ 0.32
HERC4Q5GLZ8 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC17.07■□□□□ 0.32
HERC4Q5GLZ8 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.07■□□□□ 0.32
HERC4Q5GLZ8 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC17.07■□□□□ 0.32
HERC4Q5GLZ8 CTBP2P3-201ENST00000585629 1255 ntBASIC17.07■□□□□ 0.32
HERC4Q5GLZ8 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.07■□□□□ 0.32
HERC4Q5GLZ8 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.07■□□□□ 0.32
HERC4Q5GLZ8 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HERC4Q5GLZ8 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HERC4Q5GLZ8 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
HERC4Q5GLZ8 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HERC4Q5GLZ8 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HERC4Q5GLZ8 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HERC4Q5GLZ8 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HERC4Q5GLZ8 ZBED1P1-201ENST00000502364 1930 ntBASIC17.07■□□□□ 0.32
HERC4Q5GLZ8 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HERC4Q5GLZ8 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
HERC4Q5GLZ8 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HERC4Q5GLZ8 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
HERC4Q5GLZ8 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HERC4Q5GLZ8 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HERC4Q5GLZ8 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HERC4Q5GLZ8 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HERC4Q5GLZ8 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 LINC00528-201ENST00000600723 2160 ntBASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 AC123567.1-201ENST00000548294 1261 ntBASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 AL583810.1-201ENST00000553344 1045 ntBASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 SAMD11P1-201ENST00000571429 661 ntBASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 BRI3BPP1-201ENST00000594224 787 ntBASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 AC008735.3-201ENST00000596646 500 ntBASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 AC093726.1-201ENST00000608064 963 ntBASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 REXO1L4P-201ENST00000605109 1937 ntBASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERC4Q5GLZ8 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HERC4Q5GLZ8 AC012508.2-201ENST00000567613 1472 ntBASIC17.05■□□□□ 0.32
HERC4Q5GLZ8 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
HERC4Q5GLZ8 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HERC4Q5GLZ8 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HERC4Q5GLZ8 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms