Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LTBQ06643 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
LTBQ06643 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
LTBQ06643 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LTBQ06643 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LTBQ06643 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.98□□□□□ -0.17
LTBQ06643 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LTBQ06643 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LTBQ06643 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LTBQ06643 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
LTBQ06643 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LTBQ06643 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LTBQ06643 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LTBQ06643 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LTBQ06643 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LTBQ06643 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LTBQ06643 AP000845.1-201ENST00000581677 2131 ntBASIC13.97□□□□□ -0.17
LTBQ06643 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LTBQ06643 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LTBQ06643 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.97□□□□□ -0.17
LTBQ06643 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.97□□□□□ -0.17
LTBQ06643 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
LTBQ06643 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
LTBQ06643 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
LTBQ06643 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.97□□□□□ -0.17
LTBQ06643 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
LTBQ06643 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LTBQ06643 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.97□□□□□ -0.17
LTBQ06643 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
LTBQ06643 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
LTBQ06643 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LTBQ06643 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.97□□□□□ -0.17
LTBQ06643 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LTBQ06643 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LTBQ06643 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
LTBQ06643 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LTBQ06643 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.97□□□□□ -0.17
LTBQ06643 GHSR-202ENST00000427970 912 ntBASIC13.97□□□□□ -0.17
LTBQ06643 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
LTBQ06643 HLA-DPB2-205ENST00000435074 1188 ntBASIC13.97□□□□□ -0.17
LTBQ06643 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LTBQ06643 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.97□□□□□ -0.17
LTBQ06643 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.97□□□□□ -0.17
LTBQ06643 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.97□□□□□ -0.17
LTBQ06643 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.97□□□□□ -0.17
LTBQ06643 AC000095.1-201ENST00000603208 874 ntBASIC13.97□□□□□ -0.17
LTBQ06643 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
LTBQ06643 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LTBQ06643 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
LTBQ06643 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LTBQ06643 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LTBQ06643 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
LTBQ06643 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.97□□□□□ -0.17
LTBQ06643 AC007541.1-201ENST00000570282 1469 ntBASIC13.97□□□□□ -0.17
LTBQ06643 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LTBQ06643 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
LTBQ06643 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
LTBQ06643 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LTBQ06643 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LTBQ06643 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LTBQ06643 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LTBQ06643 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LTBQ06643 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LTBQ06643 SBF1P1-201ENST00000444527 5631 ntBASIC13.97□□□□□ -0.17
LTBQ06643 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LTBQ06643 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LTBQ06643 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LTBQ06643 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LTBQ06643 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
LTBQ06643 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
LTBQ06643 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.97□□□□□ -0.17
LTBQ06643 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.97□□□□□ -0.17
LTBQ06643 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LTBQ06643 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LTBQ06643 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LTBQ06643 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
LTBQ06643 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LTBQ06643 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LTBQ06643 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.96□□□□□ -0.17
LTBQ06643 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LTBQ06643 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LTBQ06643 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LTBQ06643 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
LTBQ06643 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
LTBQ06643 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LTBQ06643 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LTBQ06643 AJ011931.1-201ENST00000618749 2492 ntBASIC13.96□□□□□ -0.17
LTBQ06643 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.17
LTBQ06643 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.96□□□□□ -0.17
LTBQ06643 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LTBQ06643 BTBD7P1-201ENST00000447253 1453 ntBASIC13.96□□□□□ -0.17
LTBQ06643 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
LTBQ06643 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
LTBQ06643 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.96□□□□□ -0.17
LTBQ06643 AL512384.1-201ENST00000406683 331 ntBASIC13.96□□□□□ -0.17
LTBQ06643 AC112492.5-201ENST00000421897 457 ntBASIC13.96□□□□□ -0.17
LTBQ06643 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.96□□□□□ -0.17
LTBQ06643 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.96□□□□□ -0.17
LTBQ06643 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LTBQ06643 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms