Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CHRNB3Q05901 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CHRNB3Q05901 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHRNB3Q05901 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHRNB3Q05901 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CHRNB3Q05901 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CHRNB3Q05901 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CHRNB3Q05901 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CHRNB3Q05901 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CHRNB3Q05901 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CHRNB3Q05901 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.52□□□□□ -0.08
CHRNB3Q05901 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.52□□□□□ -0.08
CHRNB3Q05901 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CHRNB3Q05901 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.52□□□□□ -0.08
CHRNB3Q05901 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CHRNB3Q05901 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.52□□□□□ -0.08
CHRNB3Q05901 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CHRNB3Q05901 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.52□□□□□ -0.08
CHRNB3Q05901 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CHRNB3Q05901 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CHRNB3Q05901 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CHRNB3Q05901 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
CHRNB3Q05901 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHRNB3Q05901 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.52□□□□□ -0.09
CHRNB3Q05901 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.52□□□□□ -0.09
CHRNB3Q05901 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.52□□□□□ -0.09
CHRNB3Q05901 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.52□□□□□ -0.09
CHRNB3Q05901 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.52□□□□□ -0.09
CHRNB3Q05901 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CHRNB3Q05901 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.52□□□□□ -0.09
CHRNB3Q05901 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.52□□□□□ -0.09
CHRNB3Q05901 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.52□□□□□ -0.09
CHRNB3Q05901 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.52□□□□□ -0.09
CHRNB3Q05901 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CHRNB3Q05901 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.52□□□□□ -0.09
CHRNB3Q05901 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.52□□□□□ -0.09
CHRNB3Q05901 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CHRNB3Q05901 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.52□□□□□ -0.09
CHRNB3Q05901 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CHRNB3Q05901 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHRNB3Q05901 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.52□□□□□ -0.09
CHRNB3Q05901 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.09
CHRNB3Q05901 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHRNB3Q05901 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.52□□□□□ -0.09
CHRNB3Q05901 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.52□□□□□ -0.09
CHRNB3Q05901 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CHRNB3Q05901 AL928921.2-201ENST00000641325 2442 ntBASIC14.52□□□□□ -0.09
CHRNB3Q05901 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHRNB3Q05901 AC010327.5-201ENST00000586923 3061 ntBASIC14.52□□□□□ -0.09
CHRNB3Q05901 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
CHRNB3Q05901 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CHRNB3Q05901 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CHRNB3Q05901 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.52□□□□□ -0.09
CHRNB3Q05901 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHRNB3Q05901 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHRNB3Q05901 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CHRNB3Q05901 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.51□□□□□ -0.09
CHRNB3Q05901 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
CHRNB3Q05901 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CHRNB3Q05901 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CHRNB3Q05901 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHRNB3Q05901 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CHRNB3Q05901 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CHRNB3Q05901 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CHRNB3Q05901 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.51□□□□□ -0.09
CHRNB3Q05901 AKAP8P1-201ENST00000434743 1349 ntBASIC14.51□□□□□ -0.09
CHRNB3Q05901 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CHRNB3Q05901 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.51□□□□□ -0.09
CHRNB3Q05901 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CHRNB3Q05901 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.51□□□□□ -0.09
CHRNB3Q05901 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CHRNB3Q05901 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.51□□□□□ -0.09
CHRNB3Q05901 HLA-H-201ENST00000383620 1096 ntBASIC14.51□□□□□ -0.09
CHRNB3Q05901 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.51□□□□□ -0.09
CHRNB3Q05901 AZGP1P1-201ENST00000411909 902 ntBASIC14.51□□□□□ -0.09
CHRNB3Q05901 AC142381.1-201ENST00000426099 345 ntBASIC14.51□□□□□ -0.09
CHRNB3Q05901 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CHRNB3Q05901 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.51□□□□□ -0.09
CHRNB3Q05901 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.51□□□□□ -0.09
CHRNB3Q05901 AP000344.2-201ENST00000512987 629 ntBASIC14.51□□□□□ -0.09
CHRNB3Q05901 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.51□□□□□ -0.09
CHRNB3Q05901 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.51□□□□□ -0.09
CHRNB3Q05901 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHRNB3Q05901 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.51□□□□□ -0.09
CHRNB3Q05901 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.51□□□□□ -0.09
CHRNB3Q05901 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.51□□□□□ -0.09
CHRNB3Q05901 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHRNB3Q05901 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
CHRNB3Q05901 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHRNB3Q05901 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHRNB3Q05901 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CHRNB3Q05901 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CHRNB3Q05901 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CHRNB3Q05901 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
CHRNB3Q05901 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHRNB3Q05901 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHRNB3Q05901 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHRNB3Q05901 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.51□□□□□ -0.09
CHRNB3Q05901 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.51□□□□□ -0.09
CHRNB3Q05901 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms