Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
IRX4P78413 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
IRX4P78413 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
IRX4P78413 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.97■□□□□ 0.15
IRX4P78413 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
IRX4P78413 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
IRX4P78413 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
IRX4P78413 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
IRX4P78413 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
IRX4P78413 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.97■□□□□ 0.15
IRX4P78413 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
IRX4P78413 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
IRX4P78413 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
IRX4P78413 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
IRX4P78413 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
IRX4P78413 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
IRX4P78413 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
IRX4P78413 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.97■□□□□ 0.15
IRX4P78413 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.97■□□□□ 0.15
IRX4P78413 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.97■□□□□ 0.15
IRX4P78413 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
IRX4P78413 AC010319.3-201ENST00000597028 470 ntBASIC15.97■□□□□ 0.15
IRX4P78413 MIR6787-201ENST00000616675 61 ntBASIC15.97■□□□□ 0.15
IRX4P78413 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.97■□□□□ 0.15
IRX4P78413 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.97■□□□□ 0.15
IRX4P78413 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.97■□□□□ 0.15
IRX4P78413 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.97■□□□□ 0.15
IRX4P78413 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.97■□□□□ 0.15
IRX4P78413 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.97■□□□□ 0.15
IRX4P78413 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
IRX4P78413 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
IRX4P78413 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
IRX4P78413 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
IRX4P78413 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.97■□□□□ 0.15
IRX4P78413 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.97■□□□□ 0.15
IRX4P78413 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
IRX4P78413 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
IRX4P78413 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
IRX4P78413 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.97■□□□□ 0.15
IRX4P78413 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
IRX4P78413 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
IRX4P78413 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
IRX4P78413 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
IRX4P78413 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
IRX4P78413 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
IRX4P78413 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
IRX4P78413 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
IRX4P78413 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
IRX4P78413 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
IRX4P78413 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.96■□□□□ 0.15
IRX4P78413 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
IRX4P78413 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.96■□□□□ 0.15
IRX4P78413 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
IRX4P78413 AC011477.6-201ENST00000604980 1927 ntBASIC15.96■□□□□ 0.15
IRX4P78413 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
IRX4P78413 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
IRX4P78413 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
IRX4P78413 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
IRX4P78413 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
IRX4P78413 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
IRX4P78413 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
IRX4P78413 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.96■□□□□ 0.15
IRX4P78413 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.96■□□□□ 0.15
IRX4P78413 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.96■□□□□ 0.15
IRX4P78413 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.96■□□□□ 0.15
IRX4P78413 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.96■□□□□ 0.15
IRX4P78413 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.96■□□□□ 0.15
IRX4P78413 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.96■□□□□ 0.15
IRX4P78413 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.96■□□□□ 0.15
IRX4P78413 AC104596.2-201ENST00000512793 793 ntBASIC15.96■□□□□ 0.15
IRX4P78413 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
IRX4P78413 AL583810.1-201ENST00000553344 1045 ntBASIC15.96■□□□□ 0.15
IRX4P78413 AC092337.1-201ENST00000568699 1129 ntBASIC15.96■□□□□ 0.15
IRX4P78413 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.96■□□□□ 0.15
IRX4P78413 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
IRX4P78413 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.96■□□□□ 0.15
IRX4P78413 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
IRX4P78413 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
IRX4P78413 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
IRX4P78413 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
IRX4P78413 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.96■□□□□ 0.15
IRX4P78413 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
IRX4P78413 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
IRX4P78413 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.96■□□□□ 0.15
IRX4P78413 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
IRX4P78413 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
IRX4P78413 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
IRX4P78413 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
IRX4P78413 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
IRX4P78413 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
IRX4P78413 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.96■□□□□ 0.14
IRX4P78413 AC067750.1-201ENST00000608826 6545 ntBASIC15.96■□□□□ 0.14
IRX4P78413 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
IRX4P78413 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
IRX4P78413 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
IRX4P78413 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
IRX4P78413 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
IRX4P78413 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
IRX4P78413 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
IRX4P78413 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.96■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms