Protein–RNA interactions for Protein: P62807

HIST1H2BC, Histone H2B type 1-C/E/F/G/I, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BCP62807 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
HIST1H2BCP62807 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
HIST1H2BCP62807 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
HIST1H2BCP62807 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
HIST1H2BCP62807 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC11.46□□□□□ -0.58
HIST1H2BCP62807 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
HIST1H2BCP62807 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
HIST1H2BCP62807 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC11.46□□□□□ -0.58
HIST1H2BCP62807 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC11.46□□□□□ -0.58
HIST1H2BCP62807 DDC-213ENST00000617822 1809 ntTSL 3 BASIC11.46□□□□□ -0.58
HIST1H2BCP62807 TBC1D13-202ENST00000372648 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
HIST1H2BCP62807 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
HIST1H2BCP62807 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
HIST1H2BCP62807 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
HIST1H2BCP62807 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
HIST1H2BCP62807 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
HIST1H2BCP62807 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
HIST1H2BCP62807 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 AGGF1P1-201ENST00000509500 2073 ntBASIC11.45□□□□□ -0.58
HIST1H2BCP62807 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 AC099521.2-201ENST00000619354 2036 ntBASIC11.45□□□□□ -0.58
HIST1H2BCP62807 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 AC136604.1-202ENST00000425471 771 ntBASIC11.45□□□□□ -0.58
HIST1H2BCP62807 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 AL512604.3-201ENST00000569583 964 ntBASIC11.45□□□□□ -0.58
HIST1H2BCP62807 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 SERF2-217ENST00000630046 862 ntTSL 5 BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 PCDHB19P-202ENST00000625133 2914 ntBASIC11.45□□□□□ -0.58
HIST1H2BCP62807 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 C2-209ENST00000452323 1999 ntTSL 2 BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 AL357140.3-201ENST00000639753 1983 ntBASIC11.45□□□□□ -0.58
HIST1H2BCP62807 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HIST1H2BCP62807 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
HIST1H2BCP62807 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
HIST1H2BCP62807 FOS-202ENST00000535987 1402 ntTSL 2 BASIC11.44□□□□□ -0.58
HIST1H2BCP62807 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HIST1H2BCP62807 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
HIST1H2BCP62807 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HIST1H2BCP62807 USO1-201ENST00000264904 4135 ntTSL 2 BASIC11.44□□□□□ -0.58
HIST1H2BCP62807 GID4-202ENST00000376345 1391 ntTSL 3 BASIC11.44□□□□□ -0.58
HIST1H2BCP62807 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HIST1H2BCP62807 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC11.44□□□□□ -0.58
HIST1H2BCP62807 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HIST1H2BCP62807 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
HIST1H2BCP62807 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HIST1H2BCP62807 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
HIST1H2BCP62807 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HIST1H2BCP62807 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC11.44□□□□□ -0.58
HIST1H2BCP62807 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
HIST1H2BCP62807 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HIST1H2BCP62807 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms