Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.94□□□□□ -0.18
CXCR4P61073 SPDYE11-202ENST00000450699 704 ntBASIC13.94□□□□□ -0.18
CXCR4P61073 KRT18P3-201ENST00000451602 1288 ntBASIC13.94□□□□□ -0.18
CXCR4P61073 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
CXCR4P61073 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC13.94□□□□□ -0.18
CXCR4P61073 IGHV3-62-201ENST00000520057 340 ntBASIC13.94□□□□□ -0.18
CXCR4P61073 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.94□□□□□ -0.18
CXCR4P61073 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.94□□□□□ -0.18
CXCR4P61073 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CXCR4P61073 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
CXCR4P61073 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.94□□□□□ -0.18
CXCR4P61073 SPDYE9P-201ENST00000570642 692 ntBASIC13.94□□□□□ -0.18
CXCR4P61073 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.94□□□□□ -0.18
CXCR4P61073 AC140113.2-201ENST00000604370 208 ntBASIC13.94□□□□□ -0.18
CXCR4P61073 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CXCR4P61073 SPDYE10P-202ENST00000612005 668 ntBASIC13.94□□□□□ -0.18
CXCR4P61073 SPDYE8P-202ENST00000612377 668 ntBASIC13.94□□□□□ -0.18
CXCR4P61073 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CXCR4P61073 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CXCR4P61073 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.94□□□□□ -0.18
CXCR4P61073 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
CXCR4P61073 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CXCR4P61073 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CXCR4P61073 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CXCR4P61073 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CXCR4P61073 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CXCR4P61073 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CXCR4P61073 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CXCR4P61073 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CXCR4P61073 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
CXCR4P61073 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.94□□□□□ -0.18
CXCR4P61073 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CXCR4P61073 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CXCR4P61073 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CXCR4P61073 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CXCR4P61073 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CXCR4P61073 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.94□□□□□ -0.18
CXCR4P61073 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CXCR4P61073 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CXCR4P61073 AC130686.1-201ENST00000622936 2466 ntBASIC13.93□□□□□ -0.18
CXCR4P61073 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
CXCR4P61073 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CXCR4P61073 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.93□□□□□ -0.18
CXCR4P61073 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.93□□□□□ -0.18
CXCR4P61073 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CXCR4P61073 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CXCR4P61073 AL591122.2-201ENST00000624125 1853 ntBASIC13.93□□□□□ -0.18
CXCR4P61073 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CXCR4P61073 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.93□□□□□ -0.18
CXCR4P61073 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.93□□□□□ -0.18
CXCR4P61073 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CXCR4P61073 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.93□□□□□ -0.18
CXCR4P61073 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CXCR4P61073 AC099521.3-201ENST00000624251 2938 ntBASIC13.93□□□□□ -0.18
CXCR4P61073 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CXCR4P61073 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CXCR4P61073 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CXCR4P61073 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CXCR4P61073 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CXCR4P61073 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CXCR4P61073 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CXCR4P61073 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CXCR4P61073 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CXCR4P61073 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.93□□□□□ -0.18
CXCR4P61073 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.93□□□□□ -0.18
CXCR4P61073 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CXCR4P61073 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.93□□□□□ -0.18
CXCR4P61073 AZGP1P1-201ENST00000411909 902 ntBASIC13.93□□□□□ -0.18
CXCR4P61073 SPCS2P4-201ENST00000436160 681 ntBASIC13.93□□□□□ -0.18
CXCR4P61073 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CXCR4P61073 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.93□□□□□ -0.18
CXCR4P61073 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CXCR4P61073 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.93□□□□□ -0.18
CXCR4P61073 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.93□□□□□ -0.18
CXCR4P61073 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.93□□□□□ -0.18
CXCR4P61073 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.93□□□□□ -0.18
CXCR4P61073 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.93□□□□□ -0.18
CXCR4P61073 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.93□□□□□ -0.18
CXCR4P61073 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC13.93□□□□□ -0.18
CXCR4P61073 AC027601.4-201ENST00000611259 610 ntBASIC13.93□□□□□ -0.18
CXCR4P61073 CAND2-206ENST00000626378 333 ntTSL 5 BASIC13.93□□□□□ -0.18
CXCR4P61073 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.93□□□□□ -0.18
CXCR4P61073 AC092902.6-201ENST00000641783 218 ntBASIC13.93□□□□□ -0.18
CXCR4P61073 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CXCR4P61073 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.93□□□□□ -0.18
CXCR4P61073 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CXCR4P61073 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
CXCR4P61073 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CXCR4P61073 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CXCR4P61073 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CXCR4P61073 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CXCR4P61073 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.93□□□□□ -0.18
CXCR4P61073 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CXCR4P61073 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CXCR4P61073 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CXCR4P61073 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CXCR4P61073 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CXCR4P61073 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CXCR4P61073 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CXCR4P61073 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms