Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATXN3P54252 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ATXN3P54252 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATXN3P54252 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.7■□□□□ 0.1
ATXN3P54252 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATXN3P54252 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATXN3P54252 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ATXN3P54252 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.69■□□□□ 0.1
ATXN3P54252 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATXN3P54252 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATXN3P54252 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ATXN3P54252 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.69■□□□□ 0.1
ATXN3P54252 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.69■□□□□ 0.1
ATXN3P54252 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATXN3P54252 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ATXN3P54252 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ATXN3P54252 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATXN3P54252 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATXN3P54252 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.69■□□□□ 0.1
ATXN3P54252 AC005229.1-201ENST00000392885 409 ntBASIC15.69■□□□□ 0.1
ATXN3P54252 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ATXN3P54252 SOCS2P1-201ENST00000417727 557 ntBASIC15.69■□□□□ 0.1
ATXN3P54252 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ATXN3P54252 RPL7P3-201ENST00000441388 714 ntBASIC15.69■□□□□ 0.1
ATXN3P54252 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.69■□□□□ 0.1
ATXN3P54252 FAM86LP-201ENST00000478302 853 ntBASIC15.69■□□□□ 0.1
ATXN3P54252 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.69■□□□□ 0.1
ATXN3P54252 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.69■□□□□ 0.1
ATXN3P54252 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC15.69■□□□□ 0.1
ATXN3P54252 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.69■□□□□ 0.1
ATXN3P54252 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.69■□□□□ 0.1
ATXN3P54252 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ATXN3P54252 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATXN3P54252 AC243960.2-201ENST00000600996 747 ntBASIC15.69■□□□□ 0.1
ATXN3P54252 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.69■□□□□ 0.1
ATXN3P54252 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC15.69■□□□□ 0.1
ATXN3P54252 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
ATXN3P54252 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATXN3P54252 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATXN3P54252 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
ATXN3P54252 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.69■□□□□ 0.1
ATXN3P54252 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.69■□□□□ 0.1
ATXN3P54252 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.69■□□□□ 0.1
ATXN3P54252 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
ATXN3P54252 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.69■□□□□ 0.1
ATXN3P54252 SBF1P1-201ENST00000444527 5631 ntBASIC15.69■□□□□ 0.1
ATXN3P54252 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ATXN3P54252 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATXN3P54252 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ATXN3P54252 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.69■□□□□ 0.1
ATXN3P54252 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.69■□□□□ 0.1
ATXN3P54252 CICP13-201ENST00000422015 2789 ntBASIC15.69■□□□□ 0.1
ATXN3P54252 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ATXN3P54252 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATXN3P54252 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATXN3P54252 Z97205.2-201ENST00000564697 1639 ntBASIC15.68■□□□□ 0.1
ATXN3P54252 AC005622.1-201ENST00000636801 1703 ntBASIC15.68■□□□□ 0.1
ATXN3P54252 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATXN3P54252 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATXN3P54252 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATXN3P54252 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
ATXN3P54252 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.68■□□□□ 0.1
ATXN3P54252 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATXN3P54252 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ATXN3P54252 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATXN3P54252 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
ATXN3P54252 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ATXN3P54252 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATXN3P54252 AC134915.1-201ENST00000426461 574 ntBASIC15.68■□□□□ 0.1
ATXN3P54252 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.68■□□□□ 0.1
ATXN3P54252 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.68■□□□□ 0.1
ATXN3P54252 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.68■□□□□ 0.1
ATXN3P54252 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATXN3P54252 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
ATXN3P54252 AC068587.3-201ENST00000526613 355 ntBASIC15.68■□□□□ 0.1
ATXN3P54252 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.68■□□□□ 0.1
ATXN3P54252 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
ATXN3P54252 AL359711.2-201ENST00000563105 872 ntBASIC15.68■□□□□ 0.1
ATXN3P54252 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.68■□□□□ 0.1
ATXN3P54252 LINC01115-203ENST00000606068 577 ntBASIC15.68■□□□□ 0.1
ATXN3P54252 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.68■□□□□ 0.1
ATXN3P54252 AL158212.4-201ENST00000624062 1286 ntBASIC15.68■□□□□ 0.1
ATXN3P54252 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC15.68■□□□□ 0.1
ATXN3P54252 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATXN3P54252 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
ATXN3P54252 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ATXN3P54252 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATXN3P54252 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.68■□□□□ 0.1
ATXN3P54252 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ATXN3P54252 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATXN3P54252 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATXN3P54252 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ATXN3P54252 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ATXN3P54252 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATXN3P54252 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
ATXN3P54252 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.68■□□□□ 0.1
ATXN3P54252 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.68■□□□□ 0.1
ATXN3P54252 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ATXN3P54252 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATXN3P54252 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms