Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNA3P52797 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.25□□□□□ -0.13
EFNA3P52797 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNA3P52797 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.25□□□□□ -0.13
EFNA3P52797 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.25□□□□□ -0.13
EFNA3P52797 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
EFNA3P52797 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
EFNA3P52797 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNA3P52797 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNA3P52797 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.25□□□□□ -0.13
EFNA3P52797 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
EFNA3P52797 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
EFNA3P52797 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.25□□□□□ -0.13
EFNA3P52797 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNA3P52797 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNA3P52797 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
EFNA3P52797 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNA3P52797 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
EFNA3P52797 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNA3P52797 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.25□□□□□ -0.13
EFNA3P52797 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.25□□□□□ -0.13
EFNA3P52797 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNA3P52797 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
EFNA3P52797 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
EFNA3P52797 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
EFNA3P52797 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.25□□□□□ -0.13
EFNA3P52797 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.25□□□□□ -0.13
EFNA3P52797 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.25□□□□□ -0.13
EFNA3P52797 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
EFNA3P52797 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
EFNA3P52797 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.25□□□□□ -0.13
EFNA3P52797 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.25□□□□□ -0.13
EFNA3P52797 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.25□□□□□ -0.13
EFNA3P52797 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.25□□□□□ -0.13
EFNA3P52797 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.25□□□□□ -0.13
EFNA3P52797 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNA3P52797 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.25□□□□□ -0.13
EFNA3P52797 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
EFNA3P52797 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNA3P52797 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNA3P52797 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
EFNA3P52797 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNA3P52797 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNA3P52797 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.25□□□□□ -0.13
EFNA3P52797 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
EFNA3P52797 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNA3P52797 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.25□□□□□ -0.13
EFNA3P52797 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
EFNA3P52797 AC126365.1-201ENST00000578585 1514 ntBASIC14.25□□□□□ -0.13
EFNA3P52797 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNA3P52797 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNA3P52797 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
EFNA3P52797 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
EFNA3P52797 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
EFNA3P52797 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNA3P52797 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.24□□□□□ -0.13
EFNA3P52797 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
EFNA3P52797 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNA3P52797 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
EFNA3P52797 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
EFNA3P52797 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNA3P52797 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.24□□□□□ -0.13
EFNA3P52797 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNA3P52797 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
EFNA3P52797 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNA3P52797 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNA3P52797 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNA3P52797 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNA3P52797 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNA3P52797 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNA3P52797 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNA3P52797 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.24□□□□□ -0.13
EFNA3P52797 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
EFNA3P52797 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNA3P52797 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.24□□□□□ -0.13
EFNA3P52797 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNA3P52797 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNA3P52797 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNA3P52797 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
EFNA3P52797 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.24□□□□□ -0.13
EFNA3P52797 POM121L8P-201ENST00000417732 1281 ntBASIC14.24□□□□□ -0.13
EFNA3P52797 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
EFNA3P52797 POM121L9P-203ENST00000441984 1285 ntBASIC14.24□□□□□ -0.13
EFNA3P52797 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.24□□□□□ -0.13
EFNA3P52797 AC026434.2-201ENST00000506094 1078 ntBASIC14.24□□□□□ -0.13
EFNA3P52797 RNA5SP486-201ENST00000515961 83 ntBASIC14.24□□□□□ -0.13
EFNA3P52797 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.24□□□□□ -0.13
EFNA3P52797 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.24□□□□□ -0.13
EFNA3P52797 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.24□□□□□ -0.13
EFNA3P52797 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.24□□□□□ -0.13
EFNA3P52797 AC009542.2-202ENST00000619004 1067 ntBASIC14.24□□□□□ -0.13
EFNA3P52797 AC132938.4-201ENST00000623835 848 ntBASIC14.24□□□□□ -0.13
EFNA3P52797 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.24□□□□□ -0.13
EFNA3P52797 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNA3P52797 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.24□□□□□ -0.13
EFNA3P52797 AL137783.1-201ENST00000623494 1896 ntBASIC14.24□□□□□ -0.13
EFNA3P52797 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
EFNA3P52797 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNA3P52797 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNA3P52797 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms