Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HCFC1P51610 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HCFC1P51610 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.18□□□□□ -0.3
HCFC1P51610 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HCFC1P51610 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
HCFC1P51610 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HCFC1P51610 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
HCFC1P51610 RN7SKP214-201ENST00000364208 315 ntBASIC13.18□□□□□ -0.3
HCFC1P51610 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
HCFC1P51610 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
HCFC1P51610 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HCFC1P51610 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
HCFC1P51610 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HCFC1P51610 AC125604.1-201ENST00000496255 707 ntBASIC13.18□□□□□ -0.3
HCFC1P51610 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC13.18□□□□□ -0.3
HCFC1P51610 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.18□□□□□ -0.3
HCFC1P51610 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
HCFC1P51610 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC13.18□□□□□ -0.3
HCFC1P51610 AC018635.2-201ENST00000608625 364 ntBASIC13.18□□□□□ -0.3
HCFC1P51610 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC13.18□□□□□ -0.3
HCFC1P51610 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HCFC1P51610 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.18□□□□□ -0.3
HCFC1P51610 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
HCFC1P51610 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HCFC1P51610 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
HCFC1P51610 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
HCFC1P51610 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HCFC1P51610 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
HCFC1P51610 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
HCFC1P51610 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.18□□□□□ -0.3
HCFC1P51610 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
HCFC1P51610 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.18□□□□□ -0.3
HCFC1P51610 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.18□□□□□ -0.3
HCFC1P51610 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HCFC1P51610 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.18□□□□□ -0.3
HCFC1P51610 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HCFC1P51610 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
HCFC1P51610 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HCFC1P51610 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HCFC1P51610 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC13.17□□□□□ -0.3
HCFC1P51610 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HCFC1P51610 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
HCFC1P51610 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HCFC1P51610 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
HCFC1P51610 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
HCFC1P51610 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
HCFC1P51610 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HCFC1P51610 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.17□□□□□ -0.3
HCFC1P51610 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HCFC1P51610 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.17□□□□□ -0.3
HCFC1P51610 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
HCFC1P51610 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HCFC1P51610 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
HCFC1P51610 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HCFC1P51610 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HCFC1P51610 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
HCFC1P51610 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.17□□□□□ -0.3
HCFC1P51610 CEP164P1-201ENST00000455142 418 ntBASIC13.17□□□□□ -0.3
HCFC1P51610 AC012618.1-201ENST00000461223 412 ntBASIC13.17□□□□□ -0.3
HCFC1P51610 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC13.17□□□□□ -0.3
HCFC1P51610 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.17□□□□□ -0.3
HCFC1P51610 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
HCFC1P51610 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.17□□□□□ -0.3
HCFC1P51610 AL805961.1-203ENST00000641078 1258 ntBASIC13.17□□□□□ -0.3
HCFC1P51610 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HCFC1P51610 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC13.17□□□□□ -0.3
HCFC1P51610 AC092978.1-202ENST00000637590 1327 ntBASIC13.17□□□□□ -0.3
HCFC1P51610 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.17□□□□□ -0.3
HCFC1P51610 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HCFC1P51610 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC13.17□□□□□ -0.3
HCFC1P51610 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC13.17□□□□□ -0.3
HCFC1P51610 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HCFC1P51610 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HCFC1P51610 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
HCFC1P51610 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.17□□□□□ -0.3
HCFC1P51610 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HCFC1P51610 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HCFC1P51610 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HCFC1P51610 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HCFC1P51610 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HCFC1P51610 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.17□□□□□ -0.3
HCFC1P51610 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
HCFC1P51610 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HCFC1P51610 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
HCFC1P51610 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
HCFC1P51610 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
HCFC1P51610 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HCFC1P51610 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.17□□□□□ -0.3
HCFC1P51610 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HCFC1P51610 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HCFC1P51610 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
HCFC1P51610 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HCFC1P51610 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
HCFC1P51610 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC13.17□□□□□ -0.3
HCFC1P51610 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HCFC1P51610 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.17□□□□□ -0.3
HCFC1P51610 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.17□□□□□ -0.3
HCFC1P51610 FKBP4P6-201ENST00000457486 1332 ntBASIC13.17□□□□□ -0.3
HCFC1P51610 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.17□□□□□ -0.3
HCFC1P51610 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms