Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDK7P50613 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDK7P50613 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK7P50613 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.76■□□□□ 0.27
CDK7P50613 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK7P50613 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.76■□□□□ 0.27
CDK7P50613 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK7P50613 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CDK7P50613 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK7P50613 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK7P50613 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK7P50613 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDK7P50613 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CDK7P50613 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK7P50613 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.76■□□□□ 0.27
CDK7P50613 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDK7P50613 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
CDK7P50613 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK7P50613 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CDK7P50613 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK7P50613 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK7P50613 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDK7P50613 AC006335.1-201ENST00000445200 547 ntBASIC16.76■□□□□ 0.27
CDK7P50613 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDK7P50613 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDK7P50613 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC16.76■□□□□ 0.27
CDK7P50613 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.76■□□□□ 0.27
CDK7P50613 PCBP2-OT1-201ENST00000634357 590 ntBASIC16.76■□□□□ 0.27
CDK7P50613 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK7P50613 AP000593.2-201ENST00000542775 1433 ntBASIC16.76■□□□□ 0.27
CDK7P50613 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CDK7P50613 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK7P50613 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK7P50613 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK7P50613 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CDK7P50613 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK7P50613 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK7P50613 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.75■□□□□ 0.27
CDK7P50613 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK7P50613 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CDK7P50613 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK7P50613 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.75■□□□□ 0.27
CDK7P50613 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDK7P50613 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK7P50613 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK7P50613 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDK7P50613 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDK7P50613 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK7P50613 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDK7P50613 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK7P50613 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDK7P50613 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.75■□□□□ 0.27
CDK7P50613 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CDK7P50613 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK7P50613 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDK7P50613 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDK7P50613 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC16.75■□□□□ 0.27
CDK7P50613 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK7P50613 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.75■□□□□ 0.27
CDK7P50613 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.75■□□□□ 0.27
CDK7P50613 HLA-K-203ENST00000430151 1046 ntBASIC16.75■□□□□ 0.27
CDK7P50613 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC16.75■□□□□ 0.27
CDK7P50613 AC125604.1-201ENST00000496255 707 ntBASIC16.75■□□□□ 0.27
CDK7P50613 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC16.75■□□□□ 0.27
CDK7P50613 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK7P50613 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.75■□□□□ 0.27
CDK7P50613 MIR4683-201ENST00000579659 81 ntBASIC16.75■□□□□ 0.27
CDK7P50613 RN7SL555P-201ENST00000584742 339 ntBASIC16.75■□□□□ 0.27
CDK7P50613 AC009955.4-201ENST00000597192 544 ntBASIC16.75■□□□□ 0.27
CDK7P50613 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC16.75■□□□□ 0.27
CDK7P50613 AL358472.3-201ENST00000608147 415 ntBASIC16.75■□□□□ 0.27
CDK7P50613 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK7P50613 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CDK7P50613 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.75■□□□□ 0.27
CDK7P50613 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK7P50613 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.75■□□□□ 0.27
CDK7P50613 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDK7P50613 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDK7P50613 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK7P50613 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.75■□□□□ 0.27
CDK7P50613 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDK7P50613 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.75■□□□□ 0.27
CDK7P50613 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK7P50613 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDK7P50613 AL157791.1-201ENST00000553667 1699 ntBASIC16.75■□□□□ 0.27
CDK7P50613 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDK7P50613 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.74■□□□□ 0.27
CDK7P50613 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDK7P50613 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDK7P50613 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDK7P50613 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDK7P50613 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CDK7P50613 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDK7P50613 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDK7P50613 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDK7P50613 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDK7P50613 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDK7P50613 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDK7P50613 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.74■□□□□ 0.27
CDK7P50613 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms