Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CDC34P49427 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC34P49427 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.13□□□□□ -0.47
CDC34P49427 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.13□□□□□ -0.47
CDC34P49427 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CDC34P49427 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.13□□□□□ -0.47
CDC34P49427 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.13□□□□□ -0.47
CDC34P49427 AC138969.3-201ENST00000546612 1459 ntBASIC12.13□□□□□ -0.47
CDC34P49427 AC138932.2-201ENST00000548268 1459 ntBASIC12.13□□□□□ -0.47
CDC34P49427 AC126755.4-201ENST00000549796 1459 ntBASIC12.13□□□□□ -0.47
CDC34P49427 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CDC34P49427 AL607033.1-201ENST00000623900 1599 ntBASIC12.13□□□□□ -0.47
CDC34P49427 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC34P49427 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC34P49427 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC34P49427 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC34P49427 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC34P49427 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.13□□□□□ -0.47
CDC34P49427 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC34P49427 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
CDC34P49427 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.12□□□□□ -0.47
CDC34P49427 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CDC34P49427 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CDC34P49427 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CDC34P49427 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
CDC34P49427 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CDC34P49427 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.12□□□□□ -0.47
CDC34P49427 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CDC34P49427 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CDC34P49427 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
CDC34P49427 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC12.12□□□□□ -0.47
CDC34P49427 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
CDC34P49427 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CDC34P49427 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CDC34P49427 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CDC34P49427 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
CDC34P49427 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CDC34P49427 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
CDC34P49427 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CDC34P49427 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.12□□□□□ -0.47
CDC34P49427 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
CDC34P49427 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CDC34P49427 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.12□□□□□ -0.47
CDC34P49427 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
CDC34P49427 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CDC34P49427 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CDC34P49427 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC12.12□□□□□ -0.47
CDC34P49427 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CDC34P49427 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CDC34P49427 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
CDC34P49427 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CDC34P49427 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CDC34P49427 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CDC34P49427 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC12.12□□□□□ -0.47
CDC34P49427 TSPY19P-201ENST00000418461 509 ntBASIC12.12□□□□□ -0.47
CDC34P49427 TSPY18P-201ENST00000441642 509 ntBASIC12.12□□□□□ -0.47
CDC34P49427 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CDC34P49427 VN2R19P-201ENST00000442399 1052 ntBASIC12.12□□□□□ -0.47
CDC34P49427 RNA5SP410-201ENST00000516285 106 ntBASIC12.12□□□□□ -0.47
CDC34P49427 AC105233.2-201ENST00000523697 349 ntBASIC12.12□□□□□ -0.47
CDC34P49427 AF228730.5-201ENST00000530288 346 ntBASIC12.12□□□□□ -0.47
CDC34P49427 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CDC34P49427 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC12.12□□□□□ -0.47
CDC34P49427 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
CDC34P49427 COQ9-214ENST00000567933 882 ntTSL 3 BASIC12.12□□□□□ -0.47
CDC34P49427 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CDC34P49427 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CDC34P49427 AC023141.13-201ENST00000604991 943 ntBASIC12.12□□□□□ -0.47
CDC34P49427 AC117500.6-201ENST00000624871 588 ntBASIC12.12□□□□□ -0.47
CDC34P49427 SERF2-217ENST00000630046 862 ntTSL 5 BASIC12.12□□□□□ -0.47
CDC34P49427 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CDC34P49427 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CDC34P49427 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CDC34P49427 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CDC34P49427 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CDC34P49427 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
CDC34P49427 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.12□□□□□ -0.47
CDC34P49427 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.12□□□□□ -0.47
CDC34P49427 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CDC34P49427 POM121L4P-202ENST00000427789 1891 ntBASIC12.12□□□□□ -0.47
CDC34P49427 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.12□□□□□ -0.47
CDC34P49427 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CDC34P49427 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CDC34P49427 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
CDC34P49427 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CDC34P49427 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CDC34P49427 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
CDC34P49427 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CDC34P49427 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.12□□□□□ -0.47
CDC34P49427 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
CDC34P49427 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.12□□□□□ -0.47
CDC34P49427 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CDC34P49427 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CDC34P49427 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CDC34P49427 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CDC34P49427 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CDC34P49427 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CDC34P49427 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CDC34P49427 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CDC34P49427 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms