Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
SLC9A3P48764 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
SLC9A3P48764 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SLC9A3P48764 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC9A3P48764 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
SLC9A3P48764 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC9A3P48764 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC9A3P48764 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SLC9A3P48764 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC9A3P48764 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC9A3P48764 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC9A3P48764 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SLC9A3P48764 AL080243.2-201ENST00000418783 582 ntBASIC14.08□□□□□ -0.16
SLC9A3P48764 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.08□□□□□ -0.16
SLC9A3P48764 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.08□□□□□ -0.16
SLC9A3P48764 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC9A3P48764 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.08□□□□□ -0.16
SLC9A3P48764 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.08□□□□□ -0.16
SLC9A3P48764 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SLC9A3P48764 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.08□□□□□ -0.16
SLC9A3P48764 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.08□□□□□ -0.16
SLC9A3P48764 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
SLC9A3P48764 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.08□□□□□ -0.16
SLC9A3P48764 AL033527.5-202ENST00000641632 1098 ntBASIC14.08□□□□□ -0.16
SLC9A3P48764 AL645728.2-202ENST00000641679 227 ntBASIC14.08□□□□□ -0.16
SLC9A3P48764 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC9A3P48764 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.08□□□□□ -0.16
SLC9A3P48764 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
SLC9A3P48764 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC9A3P48764 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC9A3P48764 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC9A3P48764 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
SLC9A3P48764 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
SLC9A3P48764 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
SLC9A3P48764 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC9A3P48764 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC9A3P48764 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SLC9A3P48764 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC9A3P48764 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
SLC9A3P48764 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.08□□□□□ -0.16
SLC9A3P48764 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
SLC9A3P48764 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.08□□□□□ -0.16
SLC9A3P48764 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC9A3P48764 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.08□□□□□ -0.16
SLC9A3P48764 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC9A3P48764 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC9A3P48764 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.07□□□□□ -0.16
SLC9A3P48764 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.07□□□□□ -0.16
SLC9A3P48764 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SLC9A3P48764 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.07□□□□□ -0.16
SLC9A3P48764 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SLC9A3P48764 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
SLC9A3P48764 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
SLC9A3P48764 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.07□□□□□ -0.16
SLC9A3P48764 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC9A3P48764 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SLC9A3P48764 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC9A3P48764 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC9A3P48764 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SLC9A3P48764 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC9A3P48764 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC9A3P48764 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC9A3P48764 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.07□□□□□ -0.16
SLC9A3P48764 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC9A3P48764 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.07□□□□□ -0.16
SLC9A3P48764 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SLC9A3P48764 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SLC9A3P48764 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC9A3P48764 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.07□□□□□ -0.16
SLC9A3P48764 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.07□□□□□ -0.16
SLC9A3P48764 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SLC9A3P48764 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.07□□□□□ -0.16
SLC9A3P48764 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC9A3P48764 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.07□□□□□ -0.16
SLC9A3P48764 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SLC9A3P48764 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.07□□□□□ -0.16
SLC9A3P48764 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.07□□□□□ -0.16
SLC9A3P48764 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SLC9A3P48764 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
SLC9A3P48764 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.07□□□□□ -0.16
SLC9A3P48764 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.07□□□□□ -0.16
SLC9A3P48764 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC9A3P48764 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC9A3P48764 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.07□□□□□ -0.16
SLC9A3P48764 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC9A3P48764 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC9A3P48764 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC9A3P48764 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC9A3P48764 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC9A3P48764 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
SLC9A3P48764 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC9A3P48764 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SLC9A3P48764 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.07□□□□□ -0.16
SLC9A3P48764 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC9A3P48764 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC9A3P48764 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC9A3P48764 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
SLC9A3P48764 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.07□□□□□ -0.16
SLC9A3P48764 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.07□□□□□ -0.16
SLC9A3P48764 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms