Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC005702.4-201ENST00000618393 416 ntBASIC16.34■□□□□ 0.21
SSR1P43307 AL109936.8-201ENST00000641772 604 ntBASIC16.34■□□□□ 0.21
SSR1P43307 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SSR1P43307 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SSR1P43307 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.34■□□□□ 0.21
SSR1P43307 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC16.34■□□□□ 0.21
SSR1P43307 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SSR1P43307 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SSR1P43307 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
SSR1P43307 LINC00528-201ENST00000600723 2160 ntBASIC16.34■□□□□ 0.21
SSR1P43307 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
SSR1P43307 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SSR1P43307 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SSR1P43307 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SSR1P43307 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.34■□□□□ 0.21
SSR1P43307 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SSR1P43307 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC16.34■□□□□ 0.21
SSR1P43307 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SSR1P43307 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SSR1P43307 CNTNAP3P2-201ENST00000617175 3861 ntBASIC16.33■□□□□ 0.21
SSR1P43307 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SSR1P43307 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
SSR1P43307 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SSR1P43307 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.21
SSR1P43307 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SSR1P43307 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SSR1P43307 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.33■□□□□ 0.2
SSR1P43307 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SSR1P43307 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SSR1P43307 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC16.33■□□□□ 0.2
SSR1P43307 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SSR1P43307 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SSR1P43307 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SSR1P43307 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SSR1P43307 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SSR1P43307 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SSR1P43307 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.33■□□□□ 0.2
SSR1P43307 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.33■□□□□ 0.2
SSR1P43307 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.33■□□□□ 0.2
SSR1P43307 FAM86GP-201ENST00000448322 971 ntBASIC16.33■□□□□ 0.2
SSR1P43307 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SSR1P43307 IGHV3-42-201ENST00000520410 361 ntBASIC16.33■□□□□ 0.2
SSR1P43307 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.33■□□□□ 0.2
SSR1P43307 AL512361.1-201ENST00000554200 418 ntBASIC16.33■□□□□ 0.2
SSR1P43307 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SSR1P43307 AC051619.7-201ENST00000568314 623 ntBASIC16.33■□□□□ 0.2
SSR1P43307 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.33■□□□□ 0.2
SSR1P43307 LINC01115-203ENST00000606068 577 ntBASIC16.33■□□□□ 0.2
SSR1P43307 AC023511.2-201ENST00000618803 211 ntBASIC16.33■□□□□ 0.2
SSR1P43307 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SSR1P43307 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SSR1P43307 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC16.33■□□□□ 0.2
SSR1P43307 CICP24-201ENST00000605464 2705 ntBASIC16.33■□□□□ 0.2
SSR1P43307 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
SSR1P43307 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SSR1P43307 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SSR1P43307 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.33■□□□□ 0.2
SSR1P43307 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SSR1P43307 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SSR1P43307 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.33■□□□□ 0.2
SSR1P43307 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
SSR1P43307 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SSR1P43307 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SSR1P43307 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
SSR1P43307 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SSR1P43307 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SSR1P43307 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SSR1P43307 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
SSR1P43307 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SSR1P43307 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SSR1P43307 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SSR1P43307 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.33■□□□□ 0.2
SSR1P43307 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SSR1P43307 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC16.32■□□□□ 0.2
SSR1P43307 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SSR1P43307 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.32■□□□□ 0.2
SSR1P43307 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SSR1P43307 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SSR1P43307 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SSR1P43307 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SSR1P43307 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SSR1P43307 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SSR1P43307 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SSR1P43307 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SSR1P43307 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SSR1P43307 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.32■□□□□ 0.2
SSR1P43307 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.32■□□□□ 0.2
SSR1P43307 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.32■□□□□ 0.2
SSR1P43307 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SSR1P43307 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.32■□□□□ 0.2
SSR1P43307 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.32■□□□□ 0.2
SSR1P43307 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.32■□□□□ 0.2
SSR1P43307 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SSR1P43307 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
SSR1P43307 Z97205.2-201ENST00000564697 1639 ntBASIC16.32■□□□□ 0.2
SSR1P43307 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.32■□□□□ 0.2
SSR1P43307 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SSR1P43307 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.32■□□□□ 0.2
SSR1P43307 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SSR1P43307 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms