Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP8P40818 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP8P40818 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
USP8P40818 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
USP8P40818 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.72■□□□□ 0.27
USP8P40818 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.72■□□□□ 0.27
USP8P40818 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.72■□□□□ 0.27
USP8P40818 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP8P40818 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP8P40818 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
USP8P40818 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP8P40818 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP8P40818 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.72■□□□□ 0.27
USP8P40818 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.72■□□□□ 0.27
USP8P40818 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.72■□□□□ 0.27
USP8P40818 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
USP8P40818 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
USP8P40818 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP8P40818 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP8P40818 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
USP8P40818 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP8P40818 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
USP8P40818 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.72■□□□□ 0.27
USP8P40818 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP8P40818 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP8P40818 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.72■□□□□ 0.27
USP8P40818 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
USP8P40818 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP8P40818 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP8P40818 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.72■□□□□ 0.27
USP8P40818 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
USP8P40818 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.72■□□□□ 0.27
USP8P40818 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.72■□□□□ 0.27
USP8P40818 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
USP8P40818 AL512638.1-201ENST00000457493 794 ntBASIC16.72■□□□□ 0.27
USP8P40818 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.72■□□□□ 0.27
USP8P40818 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
USP8P40818 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
USP8P40818 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
USP8P40818 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
USP8P40818 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC16.72■□□□□ 0.27
USP8P40818 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP8P40818 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
USP8P40818 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.72■□□□□ 0.27
USP8P40818 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.72■□□□□ 0.27
USP8P40818 LINC00528-201ENST00000600723 2160 ntBASIC16.72■□□□□ 0.27
USP8P40818 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
USP8P40818 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
USP8P40818 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
USP8P40818 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.72■□□□□ 0.27
USP8P40818 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC16.72■□□□□ 0.27
USP8P40818 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP8P40818 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
USP8P40818 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
USP8P40818 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
USP8P40818 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
USP8P40818 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
USP8P40818 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.71■□□□□ 0.27
USP8P40818 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
USP8P40818 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.71■□□□□ 0.27
USP8P40818 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.71■□□□□ 0.27
USP8P40818 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
USP8P40818 TET3-201ENST00000305799 5174 ntTSL 5 BASIC16.71■□□□□ 0.27
USP8P40818 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
USP8P40818 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
USP8P40818 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
USP8P40818 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
USP8P40818 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
USP8P40818 RPL5P21-201ENST00000404620 815 ntBASIC16.71■□□□□ 0.27
USP8P40818 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.71■□□□□ 0.27
USP8P40818 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
USP8P40818 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
USP8P40818 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.71■□□□□ 0.27
USP8P40818 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.71■□□□□ 0.27
USP8P40818 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.71■□□□□ 0.27
USP8P40818 AC015910.1-201ENST00000579400 975 ntBASIC16.71■□□□□ 0.27
USP8P40818 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
USP8P40818 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.71■□□□□ 0.27
USP8P40818 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
USP8P40818 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
USP8P40818 AC004461.2-201ENST00000629517 803 ntBASIC16.71■□□□□ 0.27
USP8P40818 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
USP8P40818 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
USP8P40818 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
USP8P40818 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC16.71■□□□□ 0.27
USP8P40818 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
USP8P40818 AC007686.3-201ENST00000619017 3487 ntBASIC16.71■□□□□ 0.27
USP8P40818 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.71■□□□□ 0.27
USP8P40818 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
USP8P40818 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
USP8P40818 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
USP8P40818 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
USP8P40818 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.71■□□□□ 0.27
USP8P40818 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
USP8P40818 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.71■□□□□ 0.27
USP8P40818 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
USP8P40818 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
USP8P40818 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
USP8P40818 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP8P40818 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms