Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM23P36406 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM23P36406 AC026434.2-201ENST00000506094 1078 ntBASIC14.97□□□□□ -0.01
TRIM23P36406 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM23P36406 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM23P36406 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM23P36406 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.97□□□□□ -0.01
TRIM23P36406 RN7SL560P-201ENST00000577943 264 ntBASIC14.97□□□□□ -0.01
TRIM23P36406 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
TRIM23P36406 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.97□□□□□ -0.01
TRIM23P36406 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TRIM23P36406 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TRIM23P36406 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM23P36406 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TRIM23P36406 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.97□□□□□ -0.01
TRIM23P36406 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TRIM23P36406 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.97□□□□□ -0.01
TRIM23P36406 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM23P36406 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TRIM23P36406 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.97□□□□□ -0.01
TRIM23P36406 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.97□□□□□ -0.01
TRIM23P36406 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM23P36406 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM23P36406 AL354989.2-201ENST00000435838 1540 ntBASIC14.97□□□□□ -0.01
TRIM23P36406 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM23P36406 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TRIM23P36406 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.97□□□□□ -0.01
TRIM23P36406 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM23P36406 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM23P36406 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM23P36406 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM23P36406 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
TRIM23P36406 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM23P36406 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.96□□□□□ -0.01
TRIM23P36406 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.96□□□□□ -0.01
TRIM23P36406 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM23P36406 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM23P36406 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM23P36406 FAM86MP-201ENST00000340703 885 ntBASIC14.96□□□□□ -0.01
TRIM23P36406 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.96□□□□□ -0.01
TRIM23P36406 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.96□□□□□ -0.01
TRIM23P36406 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
TRIM23P36406 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.96□□□□□ -0.01
TRIM23P36406 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM23P36406 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.96□□□□□ -0.01
TRIM23P36406 CNN2P10-201ENST00000443067 918 ntBASIC14.96□□□□□ -0.01
TRIM23P36406 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM23P36406 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM23P36406 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.96□□□□□ -0.01
TRIM23P36406 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.96□□□□□ -0.01
TRIM23P36406 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.96□□□□□ -0.01
TRIM23P36406 AC004466.1-201ENST00000599515 1080 ntBASIC14.96□□□□□ -0.01
TRIM23P36406 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.96□□□□□ -0.01
TRIM23P36406 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.96□□□□□ -0.01
TRIM23P36406 AC009542.2-202ENST00000619004 1067 ntBASIC14.96□□□□□ -0.01
TRIM23P36406 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM23P36406 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM23P36406 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
TRIM23P36406 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
TRIM23P36406 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.96□□□□□ -0.01
TRIM23P36406 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM23P36406 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM23P36406 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM23P36406 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRIM23P36406 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRIM23P36406 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRIM23P36406 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TRIM23P36406 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TRIM23P36406 WASH3P-207ENST00000560956 1394 ntBASIC14.96□□□□□ -0.02
TRIM23P36406 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRIM23P36406 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
TRIM23P36406 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRIM23P36406 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRIM23P36406 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
TRIM23P36406 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.96□□□□□ -0.02
TRIM23P36406 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TRIM23P36406 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM23P36406 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.95□□□□□ -0.02
TRIM23P36406 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
TRIM23P36406 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.95□□□□□ -0.02
TRIM23P36406 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.95□□□□□ -0.02
TRIM23P36406 CLUHP2-201ENST00000426660 1303 ntBASIC14.95□□□□□ -0.02
TRIM23P36406 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM23P36406 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.95□□□□□ -0.02
TRIM23P36406 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM23P36406 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM23P36406 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM23P36406 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
TRIM23P36406 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM23P36406 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM23P36406 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM23P36406 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM23P36406 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
TRIM23P36406 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM23P36406 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM23P36406 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
TRIM23P36406 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM23P36406 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM23P36406 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.95□□□□□ -0.02
TRIM23P36406 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms