Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
THBS4P35443 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
THBS4P35443 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
THBS4P35443 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
THBS4P35443 CICP23-201ENST00000605013 2741 ntBASIC13.47□□□□□ -0.25
THBS4P35443 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
THBS4P35443 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
THBS4P35443 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.47□□□□□ -0.25
THBS4P35443 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
THBS4P35443 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.47□□□□□ -0.25
THBS4P35443 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.47□□□□□ -0.25
THBS4P35443 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.47□□□□□ -0.25
THBS4P35443 KRT17P7-201ENST00000451704 1104 ntBASIC13.47□□□□□ -0.25
THBS4P35443 KRT18P43-201ENST00000469825 1281 ntBASIC13.47□□□□□ -0.25
THBS4P35443 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
THBS4P35443 AC011495.1-201ENST00000498085 584 ntBASIC13.47□□□□□ -0.25
THBS4P35443 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.47□□□□□ -0.25
THBS4P35443 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
THBS4P35443 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
THBS4P35443 AC092552.1-201ENST00000547243 906 ntBASIC13.47□□□□□ -0.25
THBS4P35443 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.47□□□□□ -0.25
THBS4P35443 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.47□□□□□ -0.25
THBS4P35443 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.47□□□□□ -0.25
THBS4P35443 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.47□□□□□ -0.25
THBS4P35443 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
THBS4P35443 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
THBS4P35443 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
THBS4P35443 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
THBS4P35443 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
THBS4P35443 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.47□□□□□ -0.25
THBS4P35443 AL121723.1-201ENST00000445194 1519 ntBASIC13.47□□□□□ -0.25
THBS4P35443 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
THBS4P35443 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
THBS4P35443 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.47□□□□□ -0.25
THBS4P35443 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
THBS4P35443 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
THBS4P35443 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
THBS4P35443 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.47□□□□□ -0.25
THBS4P35443 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
THBS4P35443 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
THBS4P35443 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.47□□□□□ -0.25
THBS4P35443 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.47□□□□□ -0.25
THBS4P35443 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
THBS4P35443 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
THBS4P35443 LINC00528-201ENST00000600723 2160 ntBASIC13.47□□□□□ -0.25
THBS4P35443 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
THBS4P35443 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.47□□□□□ -0.25
THBS4P35443 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
THBS4P35443 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
THBS4P35443 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.46□□□□□ -0.25
THBS4P35443 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
THBS4P35443 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.46□□□□□ -0.25
THBS4P35443 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.46□□□□□ -0.25
THBS4P35443 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
THBS4P35443 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
THBS4P35443 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
THBS4P35443 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
THBS4P35443 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
THBS4P35443 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
THBS4P35443 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
THBS4P35443 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
THBS4P35443 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.46□□□□□ -0.25
THBS4P35443 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
THBS4P35443 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
THBS4P35443 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
THBS4P35443 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
THBS4P35443 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
THBS4P35443 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
THBS4P35443 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
THBS4P35443 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
THBS4P35443 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
THBS4P35443 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
THBS4P35443 GHSR-202ENST00000427970 912 ntBASIC13.46□□□□□ -0.25
THBS4P35443 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.46□□□□□ -0.25
THBS4P35443 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.46□□□□□ -0.25
THBS4P35443 INE1-201ENST00000456273 945 ntBASIC13.46□□□□□ -0.25
THBS4P35443 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.46□□□□□ -0.25
THBS4P35443 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.46□□□□□ -0.25
THBS4P35443 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
THBS4P35443 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.46□□□□□ -0.25
THBS4P35443 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
THBS4P35443 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.46□□□□□ -0.25
THBS4P35443 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.46□□□□□ -0.25
THBS4P35443 WFDC1-204ENST00000613603 549 ntBASIC13.46□□□□□ -0.25
THBS4P35443 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.46□□□□□ -0.25
THBS4P35443 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.46□□□□□ -0.25
THBS4P35443 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.46□□□□□ -0.25
THBS4P35443 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
THBS4P35443 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
THBS4P35443 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
THBS4P35443 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
THBS4P35443 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
THBS4P35443 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
THBS4P35443 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
THBS4P35443 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
THBS4P35443 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
THBS4P35443 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
THBS4P35443 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.46□□□□□ -0.26
THBS4P35443 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
THBS4P35443 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms