Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.58□□□□□ -0.08
GPC1P35052 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.58□□□□□ -0.08
GPC1P35052 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.58□□□□□ -0.08
GPC1P35052 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.08
GPC1P35052 AC025181.2-201ENST00000606994 802 ntBASIC14.58□□□□□ -0.08
GPC1P35052 AC093512.1-201ENST00000617969 520 ntBASIC14.58□□□□□ -0.08
GPC1P35052 AC004461.2-201ENST00000629517 803 ntBASIC14.58□□□□□ -0.08
GPC1P35052 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
GPC1P35052 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
GPC1P35052 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GPC1P35052 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
GPC1P35052 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
GPC1P35052 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GPC1P35052 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GPC1P35052 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GPC1P35052 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
GPC1P35052 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.58□□□□□ -0.08
GPC1P35052 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GPC1P35052 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.58□□□□□ -0.08
GPC1P35052 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
GPC1P35052 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GPC1P35052 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GPC1P35052 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
GPC1P35052 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GPC1P35052 AC007686.3-201ENST00000619017 3487 ntBASIC14.57□□□□□ -0.08
GPC1P35052 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GPC1P35052 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GPC1P35052 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GPC1P35052 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.57□□□□□ -0.08
GPC1P35052 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.57□□□□□ -0.08
GPC1P35052 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
GPC1P35052 MROH4P-201ENST00000431302 1578 ntBASIC14.57□□□□□ -0.08
GPC1P35052 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.57□□□□□ -0.08
GPC1P35052 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GPC1P35052 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.57□□□□□ -0.08
GPC1P35052 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GPC1P35052 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GPC1P35052 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.57□□□□□ -0.08
GPC1P35052 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
GPC1P35052 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
GPC1P35052 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GPC1P35052 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
GPC1P35052 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GPC1P35052 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.57□□□□□ -0.08
GPC1P35052 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.57□□□□□ -0.08
GPC1P35052 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.57□□□□□ -0.08
GPC1P35052 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GPC1P35052 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
GPC1P35052 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.57□□□□□ -0.08
GPC1P35052 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.57□□□□□ -0.08
GPC1P35052 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.57□□□□□ -0.08
GPC1P35052 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.57□□□□□ -0.08
GPC1P35052 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.57□□□□□ -0.08
GPC1P35052 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.57□□□□□ -0.08
GPC1P35052 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GPC1P35052 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GPC1P35052 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.57□□□□□ -0.08
GPC1P35052 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.57□□□□□ -0.08
GPC1P35052 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GPC1P35052 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GPC1P35052 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
GPC1P35052 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.57□□□□□ -0.08
GPC1P35052 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GPC1P35052 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GPC1P35052 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.57□□□□□ -0.08
GPC1P35052 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GPC1P35052 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
GPC1P35052 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GPC1P35052 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.57□□□□□ -0.08
GPC1P35052 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GPC1P35052 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GPC1P35052 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.57□□□□□ -0.08
GPC1P35052 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GPC1P35052 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GPC1P35052 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.57□□□□□ -0.08
GPC1P35052 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.57□□□□□ -0.08
GPC1P35052 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.57□□□□□ -0.08
GPC1P35052 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GPC1P35052 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GPC1P35052 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.56□□□□□ -0.08
GPC1P35052 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GPC1P35052 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.56□□□□□ -0.08
GPC1P35052 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
GPC1P35052 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.56□□□□□ -0.08
GPC1P35052 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
GPC1P35052 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.56□□□□□ -0.08
GPC1P35052 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
GPC1P35052 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
GPC1P35052 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
GPC1P35052 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
GPC1P35052 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GPC1P35052 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GPC1P35052 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GPC1P35052 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
GPC1P35052 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
GPC1P35052 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.56□□□□□ -0.08
GPC1P35052 CICP24-201ENST00000605464 2705 ntBASIC14.56□□□□□ -0.08
GPC1P35052 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GPC1P35052 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
GPC1P35052 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms