Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.04□□□□□ -0.16
SHC1P29353 AC123567.1-201ENST00000548294 1261 ntBASIC14.04□□□□□ -0.16
SHC1P29353 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.04□□□□□ -0.16
SHC1P29353 AC036164.1-201ENST00000570544 333 ntBASIC14.04□□□□□ -0.16
SHC1P29353 SPDYE22P-201ENST00000582158 798 ntBASIC14.04□□□□□ -0.16
SHC1P29353 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.04□□□□□ -0.16
SHC1P29353 AC000095.1-201ENST00000603208 874 ntBASIC14.04□□□□□ -0.16
SHC1P29353 LINC02084-201ENST00000606069 1096 ntBASIC14.04□□□□□ -0.16
SHC1P29353 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.04□□□□□ -0.16
SHC1P29353 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
SHC1P29353 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
SHC1P29353 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHC1P29353 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SHC1P29353 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SHC1P29353 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
SHC1P29353 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHC1P29353 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
SHC1P29353 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.04□□□□□ -0.16
SHC1P29353 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHC1P29353 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.04□□□□□ -0.16
SHC1P29353 AC126365.1-201ENST00000578585 1514 ntBASIC14.04□□□□□ -0.16
SHC1P29353 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHC1P29353 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.04□□□□□ -0.16
SHC1P29353 AC084364.1-201ENST00000551967 1556 ntBASIC14.04□□□□□ -0.16
SHC1P29353 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SHC1P29353 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHC1P29353 GRK6P1-201ENST00000400595 1711 ntBASIC14.04□□□□□ -0.16
SHC1P29353 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SHC1P29353 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.04□□□□□ -0.16
SHC1P29353 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.04□□□□□ -0.16
SHC1P29353 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.04□□□□□ -0.16
SHC1P29353 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHC1P29353 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHC1P29353 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHC1P29353 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SHC1P29353 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SHC1P29353 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SHC1P29353 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHC1P29353 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.03□□□□□ -0.16
SHC1P29353 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHC1P29353 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SHC1P29353 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.03□□□□□ -0.16
SHC1P29353 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHC1P29353 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SHC1P29353 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.03□□□□□ -0.16
SHC1P29353 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.03□□□□□ -0.16
SHC1P29353 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHC1P29353 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHC1P29353 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHC1P29353 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SHC1P29353 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHC1P29353 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.03□□□□□ -0.16
SHC1P29353 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.03□□□□□ -0.16
SHC1P29353 MEP1AP4-201ENST00000423244 1087 ntBASIC14.03□□□□□ -0.16
SHC1P29353 AL353779.1-201ENST00000434793 351 ntBASIC14.03□□□□□ -0.16
SHC1P29353 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
SHC1P29353 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.03□□□□□ -0.16
SHC1P29353 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.03□□□□□ -0.16
SHC1P29353 AC099568.2-201ENST00000609194 695 ntBASIC14.03□□□□□ -0.16
SHC1P29353 AL662799.1-202ENST00000614205 422 ntBASIC14.03□□□□□ -0.16
SHC1P29353 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.03□□□□□ -0.16
SHC1P29353 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SHC1P29353 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
SHC1P29353 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.03□□□□□ -0.16
SHC1P29353 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHC1P29353 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SHC1P29353 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHC1P29353 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.03□□□□□ -0.16
SHC1P29353 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHC1P29353 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SHC1P29353 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.03□□□□□ -0.16
SHC1P29353 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.03□□□□□ -0.16
SHC1P29353 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHC1P29353 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHC1P29353 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHC1P29353 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHC1P29353 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
SHC1P29353 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SHC1P29353 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SHC1P29353 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.02□□□□□ -0.16
SHC1P29353 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
SHC1P29353 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
SHC1P29353 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SHC1P29353 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SHC1P29353 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
SHC1P29353 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.02□□□□□ -0.16
SHC1P29353 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.02□□□□□ -0.16
SHC1P29353 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SHC1P29353 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.02□□□□□ -0.16
SHC1P29353 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SHC1P29353 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.02□□□□□ -0.16
SHC1P29353 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
SHC1P29353 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SHC1P29353 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SHC1P29353 AL035633.1-201ENST00000406139 838 ntBASIC14.02□□□□□ -0.17
SHC1P29353 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.02□□□□□ -0.17
SHC1P29353 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.02□□□□□ -0.17
SHC1P29353 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.02□□□□□ -0.17
SHC1P29353 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.02□□□□□ -0.17
SHC1P29353 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms