Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN3P26045 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.55■□□□□ 0.08
PTPN3P26045 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN3P26045 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN3P26045 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN3P26045 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.55■□□□□ 0.08
PTPN3P26045 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN3P26045 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN3P26045 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.55■□□□□ 0.08
PTPN3P26045 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
PTPN3P26045 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
PTPN3P26045 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN3P26045 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.55■□□□□ 0.08
PTPN3P26045 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.55■□□□□ 0.08
PTPN3P26045 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.55■□□□□ 0.08
PTPN3P26045 ELK1P1-201ENST00000485699 580 ntBASIC15.55■□□□□ 0.08
PTPN3P26045 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.55■□□□□ 0.08
PTPN3P26045 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.55■□□□□ 0.08
PTPN3P26045 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.55■□□□□ 0.08
PTPN3P26045 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.55■□□□□ 0.08
PTPN3P26045 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.55■□□□□ 0.08
PTPN3P26045 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.55■□□□□ 0.08
PTPN3P26045 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.55■□□□□ 0.08
PTPN3P26045 MIR4745-201ENST00000577608 62 ntBASIC15.55■□□□□ 0.08
PTPN3P26045 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.55■□□□□ 0.08
PTPN3P26045 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
PTPN3P26045 PRSS30P-206ENST00000641773 873 ntBASIC15.55■□□□□ 0.08
PTPN3P26045 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN3P26045 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN3P26045 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN3P26045 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.55■□□□□ 0.08
PTPN3P26045 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN3P26045 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN3P26045 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN3P26045 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN3P26045 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN3P26045 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN3P26045 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN3P26045 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PTPN3P26045 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN3P26045 AL137783.1-201ENST00000623494 1896 ntBASIC15.54■□□□□ 0.08
PTPN3P26045 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN3P26045 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN3P26045 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN3P26045 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.54■□□□□ 0.08
PTPN3P26045 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN3P26045 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN3P26045 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN3P26045 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN3P26045 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN3P26045 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
PTPN3P26045 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN3P26045 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN3P26045 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN3P26045 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.54■□□□□ 0.08
PTPN3P26045 NUS1P3-201ENST00000423502 862 ntBASIC15.54■□□□□ 0.08
PTPN3P26045 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.54■□□□□ 0.08
PTPN3P26045 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.54■□□□□ 0.08
PTPN3P26045 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.54■□□□□ 0.08
PTPN3P26045 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
PTPN3P26045 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.54■□□□□ 0.08
PTPN3P26045 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.54■□□□□ 0.08
PTPN3P26045 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.54■□□□□ 0.08
PTPN3P26045 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
PTPN3P26045 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.54■□□□□ 0.08
PTPN3P26045 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.54■□□□□ 0.08
PTPN3P26045 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN3P26045 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.54■□□□□ 0.08
PTPN3P26045 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.54■□□□□ 0.08
PTPN3P26045 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.54■□□□□ 0.08
PTPN3P26045 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.54■□□□□ 0.08
PTPN3P26045 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.54■□□□□ 0.08
PTPN3P26045 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN3P26045 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN3P26045 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.54■□□□□ 0.08
PTPN3P26045 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN3P26045 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.54■□□□□ 0.08
PTPN3P26045 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PTPN3P26045 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PTPN3P26045 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.53■□□□□ 0.08
PTPN3P26045 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN3P26045 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
PTPN3P26045 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PTPN3P26045 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PTPN3P26045 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.53■□□□□ 0.08
PTPN3P26045 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN3P26045 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
PTPN3P26045 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
PTPN3P26045 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
PTPN3P26045 LINC00552-201ENST00000625151 2579 ntBASIC15.53■□□□□ 0.08
PTPN3P26045 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN3P26045 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.53■□□□□ 0.08
PTPN3P26045 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
PTPN3P26045 AC018529.2-202ENST00000611482 3087 ntBASIC15.53■□□□□ 0.08
PTPN3P26045 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.53■□□□□ 0.08
PTPN3P26045 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.53■□□□□ 0.08
PTPN3P26045 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN3P26045 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN3P26045 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTPN3P26045 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms