Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL3L1P16619 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CCL3L1P16619 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CCL3L1P16619 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC12.6□□□□□ -0.39
CCL3L1P16619 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL3L1P16619 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL3L1P16619 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL3L1P16619 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.6□□□□□ -0.39
CCL3L1P16619 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL3L1P16619 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL3L1P16619 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL3L1P16619 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL3L1P16619 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CCL3L1P16619 RNU1-114P-201ENST00000365297 166 ntBASIC12.6□□□□□ -0.39
CCL3L1P16619 MGST3-203ENST00000367885 680 ntTSL 2 BASIC12.6□□□□□ -0.39
CCL3L1P16619 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC12.6□□□□□ -0.39
CCL3L1P16619 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL3L1P16619 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CCL3L1P16619 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.6□□□□□ -0.39
CCL3L1P16619 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.6□□□□□ -0.39
CCL3L1P16619 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.6□□□□□ -0.39
CCL3L1P16619 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC12.6□□□□□ -0.39
CCL3L1P16619 AC011495.1-201ENST00000498085 584 ntBASIC12.6□□□□□ -0.39
CCL3L1P16619 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
CCL3L1P16619 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CCL3L1P16619 ENPP7P5-201ENST00000541031 1031 ntBASIC12.6□□□□□ -0.39
CCL3L1P16619 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CCL3L1P16619 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
CCL3L1P16619 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
CCL3L1P16619 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
CCL3L1P16619 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC12.6□□□□□ -0.39
CCL3L1P16619 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC12.6□□□□□ -0.39
CCL3L1P16619 SERF2-217ENST00000630046 862 ntTSL 5 BASIC12.6□□□□□ -0.39
CCL3L1P16619 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC12.6□□□□□ -0.39
CCL3L1P16619 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL3L1P16619 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CCL3L1P16619 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.6□□□□□ -0.39
CCL3L1P16619 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12.6□□□□□ -0.39
CCL3L1P16619 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL3L1P16619 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.6□□□□□ -0.39
CCL3L1P16619 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.6□□□□□ -0.39
CCL3L1P16619 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC12.6□□□□□ -0.39
CCL3L1P16619 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL3L1P16619 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CCL3L1P16619 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL3L1P16619 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL3L1P16619 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC12.6□□□□□ -0.39
CCL3L1P16619 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
CCL3L1P16619 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL3L1P16619 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL3L1P16619 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CCL3L1P16619 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
CCL3L1P16619 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL3L1P16619 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CCL3L1P16619 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CCL3L1P16619 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CCL3L1P16619 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCL3L1P16619 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC12.59□□□□□ -0.39
CCL3L1P16619 AGER-206ENST00000375070 1463 ntTSL 5 BASIC12.59□□□□□ -0.39
CCL3L1P16619 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCL3L1P16619 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL3L1P16619 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL3L1P16619 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL3L1P16619 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC12.59□□□□□ -0.39
CCL3L1P16619 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
CCL3L1P16619 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC12.59□□□□□ -0.39
CCL3L1P16619 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCL3L1P16619 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CCL3L1P16619 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC12.59□□□□□ -0.39
CCL3L1P16619 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CCL3L1P16619 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL3L1P16619 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CCL3L1P16619 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL3L1P16619 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL3L1P16619 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
CCL3L1P16619 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL3L1P16619 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL3L1P16619 ZBED1P1-201ENST00000502364 1930 ntBASIC12.59□□□□□ -0.39
CCL3L1P16619 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL3L1P16619 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL3L1P16619 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
CCL3L1P16619 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CCL3L1P16619 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL3L1P16619 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL3L1P16619 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL3L1P16619 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCL3L1P16619 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCL3L1P16619 COX5BP8-201ENST00000416911 349 ntBASIC12.59□□□□□ -0.39
CCL3L1P16619 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
CCL3L1P16619 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC12.59□□□□□ -0.39
CCL3L1P16619 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC12.59□□□□□ -0.39
CCL3L1P16619 NEU3-203ENST00000529024 581 ntTSL 3 BASIC12.59□□□□□ -0.39
CCL3L1P16619 TDH-203ENST00000531764 1110 ntBASIC12.59□□□□□ -0.39
CCL3L1P16619 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL3L1P16619 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.59□□□□□ -0.39
CCL3L1P16619 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CCL3L1P16619 AC132938.2-201ENST00000579188 680 ntBASIC12.59□□□□□ -0.39
CCL3L1P16619 ATF5-205ENST00000600336 682 ntTSL 2 BASIC12.59□□□□□ -0.39
CCL3L1P16619 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC12.59□□□□□ -0.39
CCL3L1P16619 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms