Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC13.96□□□□□ -0.17
HTR1AP08908 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.96□□□□□ -0.17
HTR1AP08908 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
HTR1AP08908 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.96□□□□□ -0.17
HTR1AP08908 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.96□□□□□ -0.17
HTR1AP08908 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HTR1AP08908 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
HTR1AP08908 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.96□□□□□ -0.17
HTR1AP08908 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HTR1AP08908 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.96□□□□□ -0.18
HTR1AP08908 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
HTR1AP08908 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
HTR1AP08908 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HTR1AP08908 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
HTR1AP08908 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.96□□□□□ -0.18
HTR1AP08908 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.96□□□□□ -0.18
HTR1AP08908 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.96□□□□□ -0.18
HTR1AP08908 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
HTR1AP08908 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HTR1AP08908 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.96□□□□□ -0.18
HTR1AP08908 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
HTR1AP08908 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.95□□□□□ -0.18
HTR1AP08908 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HTR1AP08908 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HTR1AP08908 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HTR1AP08908 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.95□□□□□ -0.18
HTR1AP08908 AC015818.8-201ENST00000587907 1519 ntBASIC13.95□□□□□ -0.18
HTR1AP08908 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HTR1AP08908 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.95□□□□□ -0.18
HTR1AP08908 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC13.95□□□□□ -0.18
HTR1AP08908 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HTR1AP08908 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
HTR1AP08908 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HTR1AP08908 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.95□□□□□ -0.18
HTR1AP08908 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.95□□□□□ -0.18
HTR1AP08908 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.95□□□□□ -0.18
HTR1AP08908 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.95□□□□□ -0.18
HTR1AP08908 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
HTR1AP08908 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
HTR1AP08908 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.95□□□□□ -0.18
HTR1AP08908 TMEM198B-204ENST00000484016 896 ntBASIC13.95□□□□□ -0.18
HTR1AP08908 RNA5SP410-201ENST00000516285 106 ntBASIC13.95□□□□□ -0.18
HTR1AP08908 AC112191.1-201ENST00000523689 701 ntBASIC13.95□□□□□ -0.18
HTR1AP08908 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.95□□□□□ -0.18
HTR1AP08908 CD63-204ENST00000546939 779 ntTSL 3 BASIC13.95□□□□□ -0.18
HTR1AP08908 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.95□□□□□ -0.18
HTR1AP08908 AL138918.1-201ENST00000568306 659 ntBASIC13.95□□□□□ -0.18
HTR1AP08908 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.95□□□□□ -0.18
HTR1AP08908 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HTR1AP08908 AC064836.3-201ENST00000607928 673 ntBASIC13.95□□□□□ -0.18
HTR1AP08908 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.95□□□□□ -0.18
HTR1AP08908 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.95□□□□□ -0.18
HTR1AP08908 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
HTR1AP08908 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HTR1AP08908 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HTR1AP08908 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HTR1AP08908 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HTR1AP08908 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HTR1AP08908 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
HTR1AP08908 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HTR1AP08908 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
HTR1AP08908 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.95□□□□□ -0.18
HTR1AP08908 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HTR1AP08908 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HTR1AP08908 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HTR1AP08908 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HTR1AP08908 AC083964.2-201ENST00000623988 2396 ntBASIC13.95□□□□□ -0.18
HTR1AP08908 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
HTR1AP08908 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
HTR1AP08908 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
HTR1AP08908 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
HTR1AP08908 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HTR1AP08908 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
HTR1AP08908 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
HTR1AP08908 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.95□□□□□ -0.18
HTR1AP08908 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
HTR1AP08908 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HTR1AP08908 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HTR1AP08908 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HTR1AP08908 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HTR1AP08908 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
HTR1AP08908 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HTR1AP08908 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
HTR1AP08908 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.94□□□□□ -0.18
HTR1AP08908 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
HTR1AP08908 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
HTR1AP08908 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HTR1AP08908 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
HTR1AP08908 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.94□□□□□ -0.18
HTR1AP08908 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HTR1AP08908 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HTR1AP08908 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HTR1AP08908 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HTR1AP08908 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
HTR1AP08908 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HTR1AP08908 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
HTR1AP08908 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
HTR1AP08908 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.94□□□□□ -0.18
HTR1AP08908 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HTR1AP08908 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms