Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 AC138969.3-201ENST00000546612 1459 ntBASIC15.1■□□□□ 0.01
CAPN1P07384 AC138932.2-201ENST00000548268 1459 ntBASIC15.1■□□□□ 0.01
CAPN1P07384 AC126755.4-201ENST00000549796 1459 ntBASIC15.1■□□□□ 0.01
CAPN1P07384 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN1P07384 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN1P07384 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN1P07384 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN1P07384 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN1P07384 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
CAPN1P07384 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN1P07384 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN1P07384 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN1P07384 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CAPN1P07384 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CAPN1P07384 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.1■□□□□ 0.01
CAPN1P07384 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.1■□□□□ 0.01
CAPN1P07384 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN1P07384 MEIS3P1-201ENST00000495167 958 ntBASIC15.1■□□□□ 0.01
CAPN1P07384 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.1■□□□□ 0.01
CAPN1P07384 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.1■□□□□ 0.01
CAPN1P07384 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.1■□□□□ 0.01
CAPN1P07384 WASH4P-201ENST00000564273 1246 ntBASIC15.1■□□□□ 0.01
CAPN1P07384 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.1■□□□□ 0.01
CAPN1P07384 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN1P07384 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN1P07384 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.1■□□□□ 0.01
CAPN1P07384 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN1P07384 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CAPN1P07384 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.1■□□□□ 0.01
CAPN1P07384 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN1P07384 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.1■□□□□ 0.01
CAPN1P07384 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.1■□□□□ 0.01
CAPN1P07384 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CAPN1P07384 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN1P07384 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN1P07384 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN1P07384 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN1P07384 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CAPN1P07384 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN1P07384 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CAPN1P07384 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.09■□□□□ 0.01
CAPN1P07384 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CAPN1P07384 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CAPN1P07384 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CAPN1P07384 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CAPN1P07384 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CAPN1P07384 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CAPN1P07384 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.09■□□□□ 0.01
CAPN1P07384 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.09■□□□□ 0.01
CAPN1P07384 MYO15B-237ENST00000642007 4893 ntBASIC15.09■□□□□ 0.01
CAPN1P07384 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.09■□□□□ 0.01
CAPN1P07384 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CAPN1P07384 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CAPN1P07384 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CAPN1P07384 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CAPN1P07384 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.09■□□□□ 0.01
CAPN1P07384 AC098614.1-201ENST00000368528 745 ntBASIC15.09■□□□□ 0.01
CAPN1P07384 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.09■□□□□ 0.01
CAPN1P07384 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.09■□□□□ 0.01
CAPN1P07384 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CAPN1P07384 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CAPN1P07384 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CAPN1P07384 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.09■□□□□ 0.01
CAPN1P07384 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.09■□□□□ 0.01
CAPN1P07384 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CAPN1P07384 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.09■□□□□ 0.01
CAPN1P07384 SLED1-202ENST00000512051 380 ntBASIC15.09■□□□□ 0.01
CAPN1P07384 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.09■□□□□ 0.01
CAPN1P07384 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CAPN1P07384 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.09■□□□□ 0.01
CAPN1P07384 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.09■□□□□ 0.01
CAPN1P07384 AC008494.3-201ENST00000606615 944 ntBASIC15.09■□□□□ 0.01
CAPN1P07384 AC074044.1-201ENST00000609673 707 ntBASIC15.09■□□□□ 0.01
CAPN1P07384 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.09■□□□□ 0.01
CAPN1P07384 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CAPN1P07384 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CAPN1P07384 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CAPN1P07384 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CAPN1P07384 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CAPN1P07384 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CAPN1P07384 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
CAPN1P07384 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CAPN1P07384 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.09■□□□□ 0.01
CAPN1P07384 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CAPN1P07384 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CAPN1P07384 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CAPN1P07384 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.09■□□□□ 0.01
CAPN1P07384 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CAPN1P07384 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CAPN1P07384 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.09■□□□□ 0.01
CAPN1P07384 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CAPN1P07384 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.09■□□□□ 0.01
CAPN1P07384 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CAPN1P07384 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.09■□□□□ 0.01
CAPN1P07384 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
CAPN1P07384 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CAPN1P07384 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.08■□□□□ 0.01
CAPN1P07384 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CAPN1P07384 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CAPN1P07384 AJ011931.1-201ENST00000618749 2492 ntBASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms