Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD74P04233 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CD74P04233 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
CD74P04233 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CD74P04233 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CD74P04233 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD74P04233 AC018665.1-201ENST00000622927 1362 ntBASIC12.85□□□□□ -0.35
CD74P04233 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CD74P04233 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CD74P04233 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.85□□□□□ -0.35
CD74P04233 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
CD74P04233 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CD74P04233 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD74P04233 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.85□□□□□ -0.35
CD74P04233 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.85□□□□□ -0.35
CD74P04233 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD74P04233 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD74P04233 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD74P04233 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD74P04233 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD74P04233 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD74P04233 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CD74P04233 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
CD74P04233 PTMS-202ENST00000389462 773 ntTSL 2 BASIC12.85□□□□□ -0.35
CD74P04233 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
CD74P04233 SPDYE17-201ENST00000412399 783 ntBASIC12.85□□□□□ -0.35
CD74P04233 AL671277.1-201ENST00000429656 993 ntBASIC12.85□□□□□ -0.35
CD74P04233 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC12.85□□□□□ -0.35
CD74P04233 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC12.85□□□□□ -0.35
CD74P04233 EMBP1-201ENST00000458200 901 ntBASIC12.85□□□□□ -0.35
CD74P04233 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC12.85□□□□□ -0.35
CD74P04233 RN7SL589P-201ENST00000481268 310 ntBASIC12.85□□□□□ -0.35
CD74P04233 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC12.85□□□□□ -0.35
CD74P04233 SLED1-202ENST00000512051 380 ntBASIC12.85□□□□□ -0.35
CD74P04233 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC12.85□□□□□ -0.35
CD74P04233 LINC01225-203ENST00000563550 1244 ntBASIC12.85□□□□□ -0.35
CD74P04233 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC12.85□□□□□ -0.35
CD74P04233 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC12.85□□□□□ -0.35
CD74P04233 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC12.85□□□□□ -0.35
CD74P04233 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD74P04233 AC064836.3-201ENST00000607928 673 ntBASIC12.85□□□□□ -0.35
CD74P04233 Z83851.2-201ENST00000609564 659 ntBASIC12.85□□□□□ -0.35
CD74P04233 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CD74P04233 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
CD74P04233 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD74P04233 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.85□□□□□ -0.35
CD74P04233 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD74P04233 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD74P04233 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD74P04233 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.85□□□□□ -0.35
CD74P04233 AGGF1P1-201ENST00000509500 2073 ntBASIC12.85□□□□□ -0.35
CD74P04233 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD74P04233 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD74P04233 AC130686.1-201ENST00000622936 2466 ntBASIC12.85□□□□□ -0.35
CD74P04233 AC090505.1-201ENST00000430515 1834 ntBASIC12.85□□□□□ -0.35
CD74P04233 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD74P04233 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD74P04233 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CD74P04233 AP3S2-216ENST00000617003 1561 ntBASIC12.85□□□□□ -0.35
CD74P04233 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
CD74P04233 PPT1-213ENST00000641319 2388 ntBASIC12.85□□□□□ -0.35
CD74P04233 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CD74P04233 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD74P04233 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC12.85□□□□□ -0.35
CD74P04233 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD74P04233 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
CD74P04233 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD74P04233 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD74P04233 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD74P04233 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC12.84□□□□□ -0.35
CD74P04233 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CD74P04233 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD74P04233 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD74P04233 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CD74P04233 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC12.84□□□□□ -0.35
CD74P04233 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
CD74P04233 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.84□□□□□ -0.35
CD74P04233 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CD74P04233 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CD74P04233 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD74P04233 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD74P04233 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.84□□□□□ -0.35
CD74P04233 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD74P04233 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD74P04233 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD74P04233 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD74P04233 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD74P04233 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC12.84□□□□□ -0.35
CD74P04233 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CD74P04233 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
CD74P04233 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.84□□□□□ -0.35
CD74P04233 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC12.84□□□□□ -0.35
CD74P04233 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.84□□□□□ -0.35
CD74P04233 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC12.84□□□□□ -0.35
CD74P04233 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD74P04233 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC12.84□□□□□ -0.35
CD74P04233 FAM86C2P-203ENST00000528684 1004 ntBASIC12.84□□□□□ -0.35
CD74P04233 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC12.84□□□□□ -0.35
CD74P04233 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
CD74P04233 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms