Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AL137783.1-201ENST00000623494 1896 ntBASIC14.82□□□□□ -0.04
TNFP01375 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFP01375 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFP01375 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TNFP01375 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TNFP01375 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.82□□□□□ -0.04
TNFP01375 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFP01375 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.82□□□□□ -0.04
TNFP01375 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TNFP01375 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TNFP01375 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.82□□□□□ -0.04
TNFP01375 MIR1247-201ENST00000408206 136 ntBASIC14.82□□□□□ -0.04
TNFP01375 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TNFP01375 NME6-203ENST00000415644 849 ntTSL 2 BASIC14.82□□□□□ -0.04
TNFP01375 GPAA1P2-201ENST00000417923 928 ntBASIC14.82□□□□□ -0.04
TNFP01375 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.82□□□□□ -0.04
TNFP01375 AP001258.2-201ENST00000529891 490 ntBASIC14.82□□□□□ -0.04
TNFP01375 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.82□□□□□ -0.04
TNFP01375 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.82□□□□□ -0.04
TNFP01375 AC073413.1-201ENST00000603927 732 ntBASIC14.82□□□□□ -0.04
TNFP01375 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.82□□□□□ -0.04
TNFP01375 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TNFP01375 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
TNFP01375 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFP01375 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TNFP01375 TMBIM7P-203ENST00000641617 1718 ntBASIC14.82□□□□□ -0.04
TNFP01375 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
TNFP01375 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TNFP01375 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFP01375 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TNFP01375 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFP01375 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFP01375 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFP01375 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TNFP01375 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFP01375 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TNFP01375 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.82□□□□□ -0.04
TNFP01375 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFP01375 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.82□□□□□ -0.04
TNFP01375 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
TNFP01375 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFP01375 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.82□□□□□ -0.04
TNFP01375 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFP01375 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFP01375 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFP01375 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.82□□□□□ -0.04
TNFP01375 AL133338.1-201ENST00000565695 1517 ntBASIC14.82□□□□□ -0.04
TNFP01375 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TNFP01375 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFP01375 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TNFP01375 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFP01375 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFP01375 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFP01375 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
TNFP01375 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFP01375 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.81□□□□□ -0.04
TNFP01375 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TNFP01375 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFP01375 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFP01375 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TNFP01375 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TNFP01375 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.81□□□□□ -0.04
TNFP01375 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.81□□□□□ -0.04
TNFP01375 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.81□□□□□ -0.04
TNFP01375 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.81□□□□□ -0.04
TNFP01375 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.81□□□□□ -0.04
TNFP01375 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TNFP01375 KRT8P13-201ENST00000463294 1010 ntBASIC14.81□□□□□ -0.04
TNFP01375 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TNFP01375 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.81□□□□□ -0.04
TNFP01375 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.81□□□□□ -0.04
TNFP01375 MIR3615-201ENST00000581999 87 ntBASIC14.81□□□□□ -0.04
TNFP01375 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.81□□□□□ -0.04
TNFP01375 AC005695.3-201ENST00000614522 232 ntBASIC14.81□□□□□ -0.04
TNFP01375 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFP01375 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFP01375 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFP01375 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
TNFP01375 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TNFP01375 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFP01375 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.81□□□□□ -0.04
TNFP01375 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFP01375 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TNFP01375 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
TNFP01375 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFP01375 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TNFP01375 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.81□□□□□ -0.04
TNFP01375 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.81□□□□□ -0.04
TNFP01375 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFP01375 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.81□□□□□ -0.04
TNFP01375 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFP01375 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFP01375 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TNFP01375 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.81□□□□□ -0.04
TNFP01375 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFP01375 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TNFP01375 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TNFP01375 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TNFP01375 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TNFP01375 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms