Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC18.13■□□□□ 0.49
MBD4O95243 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MBD4O95243 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MBD4O95243 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MBD4O95243 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MBD4O95243 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
MBD4O95243 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
MBD4O95243 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MBD4O95243 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MBD4O95243 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
MBD4O95243 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MBD4O95243 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
MBD4O95243 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC18.12■□□□□ 0.49
MBD4O95243 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC18.12■□□□□ 0.49
MBD4O95243 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MBD4O95243 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MBD4O95243 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
MBD4O95243 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
MBD4O95243 CD8B2-202ENST00000417670 633 ntBASIC18.12■□□□□ 0.49
MBD4O95243 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC18.12■□□□□ 0.49
MBD4O95243 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC18.12■□□□□ 0.49
MBD4O95243 YBX1P6-201ENST00000442962 1002 ntBASIC18.12■□□□□ 0.49
MBD4O95243 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MBD4O95243 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC18.12■□□□□ 0.49
MBD4O95243 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MBD4O95243 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC18.12■□□□□ 0.49
MBD4O95243 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
MBD4O95243 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC18.12■□□□□ 0.49
MBD4O95243 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MBD4O95243 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
MBD4O95243 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MBD4O95243 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MBD4O95243 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MBD4O95243 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
MBD4O95243 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
MBD4O95243 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MBD4O95243 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MBD4O95243 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MBD4O95243 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MBD4O95243 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MBD4O95243 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MBD4O95243 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
MBD4O95243 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MBD4O95243 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
MBD4O95243 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC18.12■□□□□ 0.49
MBD4O95243 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MBD4O95243 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MBD4O95243 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.12■□□□□ 0.49
MBD4O95243 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC18.12■□□□□ 0.49
MBD4O95243 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
MBD4O95243 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MBD4O95243 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
MBD4O95243 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC18.12■□□□□ 0.49
MBD4O95243 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC18.12■□□□□ 0.49
MBD4O95243 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MBD4O95243 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC18.11■□□□□ 0.49
MBD4O95243 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
MBD4O95243 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MBD4O95243 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
MBD4O95243 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
MBD4O95243 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MBD4O95243 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
MBD4O95243 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MBD4O95243 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MBD4O95243 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
MBD4O95243 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MBD4O95243 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC18.11■□□□□ 0.49
MBD4O95243 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MBD4O95243 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
MBD4O95243 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
MBD4O95243 FAM21FP-201ENST00000426241 1131 ntBASIC18.11■□□□□ 0.49
MBD4O95243 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
MBD4O95243 AP003171.2-201ENST00000528208 925 ntBASIC18.11■□□□□ 0.49
MBD4O95243 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC18.11■□□□□ 0.49
MBD4O95243 RPS15-202ENST00000585665 467 ntTSL 3 BASIC18.11■□□□□ 0.49
MBD4O95243 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MBD4O95243 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC18.11■□□□□ 0.49
MBD4O95243 TECR-220ENST00000600083 1204 ntTSL 2 BASIC18.11■□□□□ 0.49
MBD4O95243 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC18.11■□□□□ 0.49
MBD4O95243 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MBD4O95243 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
MBD4O95243 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC18.11■□□□□ 0.49
MBD4O95243 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
MBD4O95243 REXO1L6P-201ENST00000603433 1515 ntBASIC18.11■□□□□ 0.49
MBD4O95243 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MBD4O95243 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
MBD4O95243 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MBD4O95243 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
MBD4O95243 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC18.11■□□□□ 0.49
MBD4O95243 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
MBD4O95243 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
MBD4O95243 PARN-202ENST00000420015 2360 ntTSL 2 BASIC18.11■□□□□ 0.49
MBD4O95243 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
MBD4O95243 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
MBD4O95243 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MBD4O95243 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
MBD4O95243 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC18.1■□□□□ 0.49
MBD4O95243 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
MBD4O95243 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MBD4O95243 AC046158.3-201ENST00000624947 2558 ntBASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms