Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LTN1O94822 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LTN1O94822 TSPY25P-201ENST00000429463 745 ntBASIC19.67■□□□□ 0.74
LTN1O94822 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC19.67■□□□□ 0.74
LTN1O94822 CCNC-217ENST00000523985 958 ntTSL 2 BASIC19.67■□□□□ 0.74
LTN1O94822 TPM1-223ENST00000560445 485 ntTSL 3 BASIC19.67■□□□□ 0.74
LTN1O94822 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC19.67■□□□□ 0.74
LTN1O94822 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC19.67■□□□□ 0.74
LTN1O94822 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
LTN1O94822 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC19.67■□□□□ 0.74
LTN1O94822 AC025262.2-201ENST00000623975 1056 ntBASIC19.67■□□□□ 0.74
LTN1O94822 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC19.67■□□□□ 0.74
LTN1O94822 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC19.67■□□□□ 0.74
LTN1O94822 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LTN1O94822 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LTN1O94822 AHCYP4-201ENST00000419201 1315 ntBASIC19.67■□□□□ 0.74
LTN1O94822 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
LTN1O94822 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
LTN1O94822 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
LTN1O94822 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LTN1O94822 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
LTN1O94822 DNAJB1P1-201ENST00000429417 1024 ntBASIC19.67■□□□□ 0.74
LTN1O94822 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC19.67■□□□□ 0.74
LTN1O94822 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC19.67■□□□□ 0.74
LTN1O94822 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC19.67■□□□□ 0.74
LTN1O94822 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC19.67■□□□□ 0.74
LTN1O94822 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
LTN1O94822 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC19.67■□□□□ 0.74
LTN1O94822 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC19.67■□□□□ 0.74
LTN1O94822 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LTN1O94822 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
LTN1O94822 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LTN1O94822 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LTN1O94822 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC19.67■□□□□ 0.74
LTN1O94822 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC19.67■□□□□ 0.74
LTN1O94822 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LTN1O94822 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC19.66■□□□□ 0.74
LTN1O94822 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC19.66■□□□□ 0.74
LTN1O94822 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.66■□□□□ 0.74
LTN1O94822 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC19.66■□□□□ 0.74
LTN1O94822 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LTN1O94822 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
LTN1O94822 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
LTN1O94822 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
LTN1O94822 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LTN1O94822 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
LTN1O94822 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LTN1O94822 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC19.66■□□□□ 0.74
LTN1O94822 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC19.66■□□□□ 0.74
LTN1O94822 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC19.66■□□□□ 0.74
LTN1O94822 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
LTN1O94822 AP001065.2-201ENST00000617205 644 ntBASIC19.66■□□□□ 0.74
LTN1O94822 AC073911.3-201ENST00000624401 631 ntBASIC19.66■□□□□ 0.74
LTN1O94822 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC19.66■□□□□ 0.74
LTN1O94822 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LTN1O94822 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LTN1O94822 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LTN1O94822 LINC01101-201ENST00000622953 1884 ntBASIC19.66■□□□□ 0.74
LTN1O94822 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LTN1O94822 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC19.65■□□□□ 0.74
LTN1O94822 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC19.65■□□□□ 0.74
LTN1O94822 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LTN1O94822 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC19.65■□□□□ 0.74
LTN1O94822 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LTN1O94822 HNRNPA1P27-201ENST00000412087 955 ntBASIC19.65■□□□□ 0.74
LTN1O94822 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC19.65■□□□□ 0.74
LTN1O94822 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC19.65■□□□□ 0.74
LTN1O94822 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC19.65■□□□□ 0.74
LTN1O94822 AP002803.1-201ENST00000528836 498 ntBASIC19.65■□□□□ 0.74
LTN1O94822 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LTN1O94822 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC19.65■□□□□ 0.74
LTN1O94822 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LTN1O94822 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
LTN1O94822 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LTN1O94822 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC19.65■□□□□ 0.74
LTN1O94822 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC19.65■□□□□ 0.74
LTN1O94822 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.65■□□□□ 0.74
LTN1O94822 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.65■□□□□ 0.74
LTN1O94822 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LTN1O94822 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LTN1O94822 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LTN1O94822 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC19.65■□□□□ 0.74
LTN1O94822 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LTN1O94822 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
LTN1O94822 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LTN1O94822 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LTN1O94822 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LTN1O94822 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LTN1O94822 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LTN1O94822 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LTN1O94822 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LTN1O94822 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC19.65■□□□□ 0.74
LTN1O94822 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LTN1O94822 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC19.65■□□□□ 0.74
LTN1O94822 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC19.65■□□□□ 0.74
LTN1O94822 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC19.65■□□□□ 0.74
LTN1O94822 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LTN1O94822 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC19.65■□□□□ 0.74
LTN1O94822 AC084781.1-201ENST00000613737 656 ntBASIC19.65■□□□□ 0.74
LTN1O94822 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms