Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
RFPL1O75677 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFPL1O75677 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFPL1O75677 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RFPL1O75677 AC104581.4-201ENST00000623126 3052 ntBASIC15.34■□□□□ 0.05
RFPL1O75677 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
RFPL1O75677 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.34■□□□□ 0.05
RFPL1O75677 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFPL1O75677 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFPL1O75677 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.34■□□□□ 0.05
RFPL1O75677 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFPL1O75677 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFPL1O75677 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.34■□□□□ 0.05
RFPL1O75677 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.34■□□□□ 0.05
RFPL1O75677 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
RFPL1O75677 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.34■□□□□ 0.05
RFPL1O75677 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFPL1O75677 RPL13P2-201ENST00000440687 659 ntBASIC15.34■□□□□ 0.05
RFPL1O75677 SPTLC1P1-201ENST00000447199 261 ntBASIC15.34■□□□□ 0.05
RFPL1O75677 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.34■□□□□ 0.05
RFPL1O75677 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.34■□□□□ 0.05
RFPL1O75677 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.34■□□□□ 0.05
RFPL1O75677 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFPL1O75677 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.34■□□□□ 0.05
RFPL1O75677 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFPL1O75677 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.34■□□□□ 0.05
RFPL1O75677 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.34■□□□□ 0.05
RFPL1O75677 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.34■□□□□ 0.05
RFPL1O75677 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFPL1O75677 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFPL1O75677 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFPL1O75677 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RFPL1O75677 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.34■□□□□ 0.05
RFPL1O75677 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.34■□□□□ 0.05
RFPL1O75677 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RFPL1O75677 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFPL1O75677 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFPL1O75677 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.34■□□□□ 0.05
RFPL1O75677 CU639417.3-201ENST00000624240 1404 ntBASIC15.34■□□□□ 0.05
RFPL1O75677 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFPL1O75677 AC136759.1-202ENST00000530858 2194 ntBASIC15.34■□□□□ 0.05
RFPL1O75677 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.33■□□□□ 0.05
RFPL1O75677 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.33■□□□□ 0.05
RFPL1O75677 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
RFPL1O75677 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
RFPL1O75677 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RFPL1O75677 AC007787.1-201ENST00000588095 1583 ntBASIC15.33■□□□□ 0.05
RFPL1O75677 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
RFPL1O75677 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
RFPL1O75677 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RFPL1O75677 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.33■□□□□ 0.04
RFPL1O75677 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
RFPL1O75677 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.33■□□□□ 0.04
RFPL1O75677 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RFPL1O75677 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
RFPL1O75677 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.33■□□□□ 0.04
RFPL1O75677 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RFPL1O75677 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RFPL1O75677 AL080243.2-201ENST00000418783 582 ntBASIC15.33■□□□□ 0.04
RFPL1O75677 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.33■□□□□ 0.04
RFPL1O75677 AC007274.1-201ENST00000439805 662 ntBASIC15.33■□□□□ 0.04
RFPL1O75677 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RFPL1O75677 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.33■□□□□ 0.04
RFPL1O75677 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.33■□□□□ 0.04
RFPL1O75677 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.33■□□□□ 0.04
RFPL1O75677 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.33■□□□□ 0.04
RFPL1O75677 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.33■□□□□ 0.04
RFPL1O75677 MIR6069-201ENST00000620069 79 ntBASIC15.33■□□□□ 0.04
RFPL1O75677 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RFPL1O75677 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RFPL1O75677 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RFPL1O75677 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RFPL1O75677 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
RFPL1O75677 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.33■□□□□ 0.04
RFPL1O75677 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RFPL1O75677 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.33■□□□□ 0.04
RFPL1O75677 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
RFPL1O75677 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RFPL1O75677 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RFPL1O75677 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RFPL1O75677 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.33■□□□□ 0.04
RFPL1O75677 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.33■□□□□ 0.04
RFPL1O75677 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RFPL1O75677 AC138969.3-201ENST00000546612 1459 ntBASIC15.33■□□□□ 0.04
RFPL1O75677 AC138932.2-201ENST00000548268 1459 ntBASIC15.33■□□□□ 0.04
RFPL1O75677 AC126755.4-201ENST00000549796 1459 ntBASIC15.33■□□□□ 0.04
RFPL1O75677 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RFPL1O75677 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
RFPL1O75677 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RFPL1O75677 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFPL1O75677 CETN4P-206ENST00000642099 2168 ntBASIC15.32■□□□□ 0.04
RFPL1O75677 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RFPL1O75677 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RFPL1O75677 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFPL1O75677 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFPL1O75677 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.32■□□□□ 0.04
RFPL1O75677 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.32■□□□□ 0.04
RFPL1O75677 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.32■□□□□ 0.04
RFPL1O75677 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFPL1O75677 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms