Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDUFS3O75489 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
NDUFS3O75489 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDUFS3O75489 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDUFS3O75489 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.25■□□□□ 0.03
NDUFS3O75489 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDUFS3O75489 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NDUFS3O75489 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDUFS3O75489 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDUFS3O75489 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDUFS3O75489 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDUFS3O75489 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.25■□□□□ 0.03
NDUFS3O75489 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.25■□□□□ 0.03
NDUFS3O75489 GAPDHP40-201ENST00000505218 1006 ntBASIC15.25■□□□□ 0.03
NDUFS3O75489 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.25■□□□□ 0.03
NDUFS3O75489 AC026410.3-201ENST00000514280 936 ntBASIC15.25■□□□□ 0.03
NDUFS3O75489 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.25■□□□□ 0.03
NDUFS3O75489 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.25■□□□□ 0.03
NDUFS3O75489 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDUFS3O75489 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.25■□□□□ 0.03
NDUFS3O75489 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDUFS3O75489 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.25■□□□□ 0.03
NDUFS3O75489 AC107373.2-201ENST00000607735 490 ntBASIC15.25■□□□□ 0.03
NDUFS3O75489 AC004233.3-201ENST00000607794 1269 ntBASIC15.25■□□□□ 0.03
NDUFS3O75489 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.25■□□□□ 0.03
NDUFS3O75489 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
NDUFS3O75489 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NDUFS3O75489 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDUFS3O75489 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDUFS3O75489 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDUFS3O75489 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NDUFS3O75489 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDUFS3O75489 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDUFS3O75489 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.25■□□□□ 0.03
NDUFS3O75489 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
NDUFS3O75489 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDUFS3O75489 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NDUFS3O75489 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDUFS3O75489 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.25■□□□□ 0.03
NDUFS3O75489 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDUFS3O75489 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFS3O75489 SLC7A15P-201ENST00000424028 1363 ntBASIC15.24■□□□□ 0.03
NDUFS3O75489 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFS3O75489 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFS3O75489 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFS3O75489 AC007787.1-201ENST00000588095 1583 ntBASIC15.24■□□□□ 0.03
NDUFS3O75489 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFS3O75489 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFS3O75489 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFS3O75489 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFS3O75489 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFS3O75489 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.24■□□□□ 0.03
NDUFS3O75489 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFS3O75489 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFS3O75489 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFS3O75489 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFS3O75489 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFS3O75489 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFS3O75489 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFS3O75489 SERBP1P5-201ENST00000510079 1181 ntBASIC15.24■□□□□ 0.03
NDUFS3O75489 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.24■□□□□ 0.03
NDUFS3O75489 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.24■□□□□ 0.03
NDUFS3O75489 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.24■□□□□ 0.03
NDUFS3O75489 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.24■□□□□ 0.03
NDUFS3O75489 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.24■□□□□ 0.03
NDUFS3O75489 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.24■□□□□ 0.03
NDUFS3O75489 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.24■□□□□ 0.03
NDUFS3O75489 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.24■□□□□ 0.03
NDUFS3O75489 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.24■□□□□ 0.03
NDUFS3O75489 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFS3O75489 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFS3O75489 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.24■□□□□ 0.03
NDUFS3O75489 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
NDUFS3O75489 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFS3O75489 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFS3O75489 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFS3O75489 CICP24-201ENST00000605464 2705 ntBASIC15.24■□□□□ 0.03
NDUFS3O75489 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFS3O75489 AL138799.1-201ENST00000448213 1675 ntBASIC15.24■□□□□ 0.03
NDUFS3O75489 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFS3O75489 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFS3O75489 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFS3O75489 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFS3O75489 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFS3O75489 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
NDUFS3O75489 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFS3O75489 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFS3O75489 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.24■□□□□ 0.03
NDUFS3O75489 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFS3O75489 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFS3O75489 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.24■□□□□ 0.03
NDUFS3O75489 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFS3O75489 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
NDUFS3O75489 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFS3O75489 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.24■□□□□ 0.03
NDUFS3O75489 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFS3O75489 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFS3O75489 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NDUFS3O75489 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
NDUFS3O75489 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms