Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GPC4O75487 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.38■□□□□ 0.05
GPC4O75487 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
GPC4O75487 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
GPC4O75487 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
GPC4O75487 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.38■□□□□ 0.05
GPC4O75487 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
GPC4O75487 TIMM17BP1-201ENST00000545713 516 ntBASIC15.38■□□□□ 0.05
GPC4O75487 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.38■□□□□ 0.05
GPC4O75487 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.38■□□□□ 0.05
GPC4O75487 AL355385.1-201ENST00000606123 409 ntBASIC15.38■□□□□ 0.05
GPC4O75487 AJ011932.1-201ENST00000621707 465 ntBASIC15.38■□□□□ 0.05
GPC4O75487 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.38■□□□□ 0.05
GPC4O75487 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GPC4O75487 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GPC4O75487 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
GPC4O75487 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.38■□□□□ 0.05
GPC4O75487 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GPC4O75487 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.38■□□□□ 0.05
GPC4O75487 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.38■□□□□ 0.05
GPC4O75487 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GPC4O75487 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
GPC4O75487 AC138969.3-201ENST00000546612 1459 ntBASIC15.38■□□□□ 0.05
GPC4O75487 AC138932.2-201ENST00000548268 1459 ntBASIC15.38■□□□□ 0.05
GPC4O75487 AC126755.4-201ENST00000549796 1459 ntBASIC15.38■□□□□ 0.05
GPC4O75487 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.38■□□□□ 0.05
GPC4O75487 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.38■□□□□ 0.05
GPC4O75487 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
GPC4O75487 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.38■□□□□ 0.05
GPC4O75487 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
GPC4O75487 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GPC4O75487 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.37■□□□□ 0.05
GPC4O75487 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
GPC4O75487 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
GPC4O75487 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
GPC4O75487 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
GPC4O75487 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
GPC4O75487 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.37■□□□□ 0.05
GPC4O75487 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
GPC4O75487 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
GPC4O75487 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
GPC4O75487 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
GPC4O75487 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
GPC4O75487 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
GPC4O75487 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
GPC4O75487 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
GPC4O75487 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
GPC4O75487 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
GPC4O75487 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
GPC4O75487 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
GPC4O75487 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.37■□□□□ 0.05
GPC4O75487 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
GPC4O75487 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.37■□□□□ 0.05
GPC4O75487 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.37■□□□□ 0.05
GPC4O75487 AL589987.1-201ENST00000453380 819 ntBASIC15.37■□□□□ 0.05
GPC4O75487 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.37■□□□□ 0.05
GPC4O75487 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
GPC4O75487 SPCS2P1-201ENST00000561636 679 ntBASIC15.37■□□□□ 0.05
GPC4O75487 AC015910.1-201ENST00000579400 975 ntBASIC15.37■□□□□ 0.05
GPC4O75487 AL096865.1-201ENST00000606796 927 ntBASIC15.37■□□□□ 0.05
GPC4O75487 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.37■□□□□ 0.05
GPC4O75487 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.37■□□□□ 0.05
GPC4O75487 AC004790.1-201ENST00000612686 536 ntBASIC15.37■□□□□ 0.05
GPC4O75487 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.37■□□□□ 0.05
GPC4O75487 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.37■□□□□ 0.05
GPC4O75487 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
GPC4O75487 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
GPC4O75487 SNX18-202ENST00000343017 3140 ntBASIC15.37■□□□□ 0.05
GPC4O75487 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.37■□□□□ 0.05
GPC4O75487 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
GPC4O75487 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
GPC4O75487 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.37■□□□□ 0.05
GPC4O75487 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
GPC4O75487 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
GPC4O75487 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.37■□□□□ 0.05
GPC4O75487 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
GPC4O75487 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.37■□□□□ 0.05
GPC4O75487 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
GPC4O75487 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
GPC4O75487 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
GPC4O75487 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
GPC4O75487 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
GPC4O75487 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
GPC4O75487 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
GPC4O75487 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.37■□□□□ 0.05
GPC4O75487 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
GPC4O75487 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
GPC4O75487 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.36■□□□□ 0.05
GPC4O75487 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
GPC4O75487 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GPC4O75487 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
GPC4O75487 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GPC4O75487 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
GPC4O75487 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.36■□□□□ 0.05
GPC4O75487 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
GPC4O75487 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
GPC4O75487 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GPC4O75487 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.36■□□□□ 0.05
GPC4O75487 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GPC4O75487 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms