Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.74□□□□□ -0.05
CPNE3O75131 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CPNE3O75131 CICP14-201ENST00000629111 2732 ntBASIC14.74□□□□□ -0.05
CPNE3O75131 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CPNE3O75131 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.74□□□□□ -0.05
CPNE3O75131 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CPNE3O75131 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.74□□□□□ -0.05
CPNE3O75131 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CPNE3O75131 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.74□□□□□ -0.05
CPNE3O75131 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CPNE3O75131 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CPNE3O75131 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CPNE3O75131 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.74□□□□□ -0.05
CPNE3O75131 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.74□□□□□ -0.05
CPNE3O75131 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.74□□□□□ -0.05
CPNE3O75131 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.74□□□□□ -0.05
CPNE3O75131 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CPNE3O75131 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.74□□□□□ -0.05
CPNE3O75131 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CPNE3O75131 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.74□□□□□ -0.05
CPNE3O75131 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.74□□□□□ -0.05
CPNE3O75131 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.74□□□□□ -0.05
CPNE3O75131 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CPNE3O75131 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CPNE3O75131 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.74□□□□□ -0.05
CPNE3O75131 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.74□□□□□ -0.05
CPNE3O75131 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CPNE3O75131 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CPNE3O75131 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.74□□□□□ -0.05
CPNE3O75131 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.74□□□□□ -0.05
CPNE3O75131 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CPNE3O75131 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.74□□□□□ -0.05
CPNE3O75131 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.74□□□□□ -0.05
CPNE3O75131 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CPNE3O75131 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CPNE3O75131 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CPNE3O75131 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
CPNE3O75131 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CPNE3O75131 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CPNE3O75131 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CPNE3O75131 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.73□□□□□ -0.05
CPNE3O75131 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CPNE3O75131 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.73□□□□□ -0.05
CPNE3O75131 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.73□□□□□ -0.05
CPNE3O75131 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CPNE3O75131 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CPNE3O75131 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CPNE3O75131 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.73□□□□□ -0.05
CPNE3O75131 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.73□□□□□ -0.05
CPNE3O75131 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.73□□□□□ -0.05
CPNE3O75131 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CPNE3O75131 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CPNE3O75131 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.73□□□□□ -0.05
CPNE3O75131 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.73□□□□□ -0.05
CPNE3O75131 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.73□□□□□ -0.05
CPNE3O75131 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CPNE3O75131 ACKR1-201ENST00000368121 1240 ntBASIC14.73□□□□□ -0.05
CPNE3O75131 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CPNE3O75131 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CPNE3O75131 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CPNE3O75131 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CPNE3O75131 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.73□□□□□ -0.05
CPNE3O75131 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
CPNE3O75131 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CPNE3O75131 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.73□□□□□ -0.05
CPNE3O75131 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.73□□□□□ -0.05
CPNE3O75131 AC093433.1-201ENST00000458048 571 ntBASIC14.73□□□□□ -0.05
CPNE3O75131 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.73□□□□□ -0.05
CPNE3O75131 LINC02447-202ENST00000501888 2146 ntBASIC14.73□□□□□ -0.05
CPNE3O75131 AP001582.1-201ENST00000525856 295 ntBASIC14.73□□□□□ -0.05
CPNE3O75131 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
CPNE3O75131 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.73□□□□□ -0.05
CPNE3O75131 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.73□□□□□ -0.05
CPNE3O75131 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.73□□□□□ -0.05
CPNE3O75131 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.73□□□□□ -0.05
CPNE3O75131 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CPNE3O75131 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.73□□□□□ -0.05
CPNE3O75131 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.73□□□□□ -0.05
CPNE3O75131 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.73□□□□□ -0.05
CPNE3O75131 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.73□□□□□ -0.05
CPNE3O75131 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.73□□□□□ -0.05
CPNE3O75131 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CPNE3O75131 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CPNE3O75131 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CPNE3O75131 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CPNE3O75131 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CPNE3O75131 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.73□□□□□ -0.05
CPNE3O75131 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CPNE3O75131 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CPNE3O75131 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CPNE3O75131 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CPNE3O75131 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CPNE3O75131 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CPNE3O75131 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CPNE3O75131 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.73□□□□□ -0.05
CPNE3O75131 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CPNE3O75131 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CPNE3O75131 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
CPNE3O75131 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.73□□□□□ -0.05
CPNE3O75131 AC139749.1-202ENST00000617529 3139 ntBASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms