Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AL049840.4-201ENST00000602422 811 ntBASIC17.12■□□□□ 0.33
ACTN4O43707 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ACTN4O43707 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.12■□□□□ 0.33
ACTN4O43707 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.12■□□□□ 0.33
ACTN4O43707 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ACTN4O43707 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ACTN4O43707 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTN4O43707 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.12■□□□□ 0.33
ACTN4O43707 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ACTN4O43707 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTN4O43707 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC17.12■□□□□ 0.33
ACTN4O43707 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.12■□□□□ 0.33
ACTN4O43707 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTN4O43707 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ACTN4O43707 AC139749.1-202ENST00000617529 3139 ntBASIC17.12■□□□□ 0.33
ACTN4O43707 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
ACTN4O43707 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ACTN4O43707 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ACTN4O43707 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ACTN4O43707 AL138799.1-201ENST00000448213 1675 ntBASIC17.11■□□□□ 0.33
ACTN4O43707 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ACTN4O43707 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ACTN4O43707 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ACTN4O43707 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ACTN4O43707 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ACTN4O43707 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ACTN4O43707 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ACTN4O43707 VDAC1P7-201ENST00000462417 847 ntBASIC17.11■□□□□ 0.33
ACTN4O43707 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.11■□□□□ 0.33
ACTN4O43707 AC090142.2-201ENST00000483263 416 ntBASIC17.11■□□□□ 0.33
ACTN4O43707 DOC2GP-202ENST00000514950 1163 ntBASIC17.11■□□□□ 0.33
ACTN4O43707 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ACTN4O43707 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.11■□□□□ 0.33
ACTN4O43707 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.11■□□□□ 0.33
ACTN4O43707 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ACTN4O43707 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.11■□□□□ 0.33
ACTN4O43707 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.11■□□□□ 0.33
ACTN4O43707 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.11■□□□□ 0.33
ACTN4O43707 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
ACTN4O43707 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ACTN4O43707 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ACTN4O43707 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC17.11■□□□□ 0.33
ACTN4O43707 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ACTN4O43707 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC17.11■□□□□ 0.33
ACTN4O43707 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.11■□□□□ 0.33
ACTN4O43707 BX640514.1-201ENST00000583223 1918 ntBASIC17.11■□□□□ 0.33
ACTN4O43707 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ACTN4O43707 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ACTN4O43707 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ACTN4O43707 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ACTN4O43707 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ACTN4O43707 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
ACTN4O43707 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC17.11■□□□□ 0.33
ACTN4O43707 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ACTN4O43707 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ACTN4O43707 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.1■□□□□ 0.33
ACTN4O43707 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ACTN4O43707 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ACTN4O43707 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ACTN4O43707 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
ACTN4O43707 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ACTN4O43707 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ACTN4O43707 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ACTN4O43707 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ACTN4O43707 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ACTN4O43707 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ACTN4O43707 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ACTN4O43707 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ACTN4O43707 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
ACTN4O43707 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ACTN4O43707 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ACTN4O43707 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.1■□□□□ 0.33
ACTN4O43707 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ACTN4O43707 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.1■□□□□ 0.33
ACTN4O43707 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.1■□□□□ 0.33
ACTN4O43707 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.1■□□□□ 0.33
ACTN4O43707 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.1■□□□□ 0.33
ACTN4O43707 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ACTN4O43707 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.1■□□□□ 0.33
ACTN4O43707 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ACTN4O43707 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.1■□□□□ 0.33
ACTN4O43707 AC006538.3-201ENST00000612495 578 ntBASIC17.1■□□□□ 0.33
ACTN4O43707 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ACTN4O43707 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ACTN4O43707 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ACTN4O43707 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ACTN4O43707 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC17.1■□□□□ 0.33
ACTN4O43707 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.1■□□□□ 0.33
ACTN4O43707 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ACTN4O43707 AL137783.1-201ENST00000623494 1896 ntBASIC17.1■□□□□ 0.33
ACTN4O43707 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.09■□□□□ 0.33
ACTN4O43707 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ACTN4O43707 AC023090.2-201ENST00000625182 2110 ntBASIC17.09■□□□□ 0.33
ACTN4O43707 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ACTN4O43707 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ACTN4O43707 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ACTN4O43707 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
ACTN4O43707 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ACTN4O43707 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ACTN4O43707 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms