Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RNF13O43567 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
RNF13O43567 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RNF13O43567 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
RNF13O43567 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.96□□□□□ -0.17
RNF13O43567 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.96□□□□□ -0.17
RNF13O43567 AC241585.1-201ENST00000433527 519 ntBASIC13.96□□□□□ -0.17
RNF13O43567 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.96□□□□□ -0.17
RNF13O43567 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RNF13O43567 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.96□□□□□ -0.17
RNF13O43567 KRT18P43-201ENST00000469825 1281 ntBASIC13.96□□□□□ -0.17
RNF13O43567 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RNF13O43567 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.96□□□□□ -0.17
RNF13O43567 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.96□□□□□ -0.17
RNF13O43567 DUX4L27-201ENST00000554796 1261 ntBASIC13.96□□□□□ -0.17
RNF13O43567 AL590560.3-201ENST00000623350 461 ntBASIC13.96□□□□□ -0.17
RNF13O43567 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RNF13O43567 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.96□□□□□ -0.17
RNF13O43567 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
RNF13O43567 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RNF13O43567 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.96□□□□□ -0.17
RNF13O43567 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RNF13O43567 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RNF13O43567 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RNF13O43567 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.96□□□□□ -0.18
RNF13O43567 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.96□□□□□ -0.18
RNF13O43567 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
RNF13O43567 CICP14-201ENST00000629111 2732 ntBASIC13.96□□□□□ -0.18
RNF13O43567 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RNF13O43567 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RNF13O43567 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.96□□□□□ -0.18
RNF13O43567 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.96□□□□□ -0.18
RNF13O43567 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RNF13O43567 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
RNF13O43567 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.96□□□□□ -0.18
RNF13O43567 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
RNF13O43567 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
RNF13O43567 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF13O43567 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF13O43567 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.95□□□□□ -0.18
RNF13O43567 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RNF13O43567 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF13O43567 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RNF13O43567 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF13O43567 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
RNF13O43567 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
RNF13O43567 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.95□□□□□ -0.18
RNF13O43567 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF13O43567 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RNF13O43567 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF13O43567 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.95□□□□□ -0.18
RNF13O43567 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF13O43567 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RNF13O43567 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.95□□□□□ -0.18
RNF13O43567 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.95□□□□□ -0.18
RNF13O43567 FAM8A3P-201ENST00000427218 844 ntBASIC13.95□□□□□ -0.18
RNF13O43567 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.95□□□□□ -0.18
RNF13O43567 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.95□□□□□ -0.18
RNF13O43567 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
RNF13O43567 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
RNF13O43567 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.95□□□□□ -0.18
RNF13O43567 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.95□□□□□ -0.18
RNF13O43567 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.95□□□□□ -0.18
RNF13O43567 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.95□□□□□ -0.18
RNF13O43567 AL390754.1-201ENST00000619088 582 ntBASIC13.95□□□□□ -0.18
RNF13O43567 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.95□□□□□ -0.18
RNF13O43567 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
RNF13O43567 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF13O43567 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RNF13O43567 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF13O43567 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.95□□□□□ -0.18
RNF13O43567 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.95□□□□□ -0.18
RNF13O43567 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF13O43567 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RNF13O43567 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF13O43567 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RNF13O43567 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.95□□□□□ -0.18
RNF13O43567 AL121723.1-201ENST00000445194 1519 ntBASIC13.95□□□□□ -0.18
RNF13O43567 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF13O43567 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RNF13O43567 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
RNF13O43567 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF13O43567 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF13O43567 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF13O43567 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
RNF13O43567 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF13O43567 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF13O43567 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.94□□□□□ -0.18
RNF13O43567 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.94□□□□□ -0.18
RNF13O43567 AC138969.3-201ENST00000546612 1459 ntBASIC13.94□□□□□ -0.18
RNF13O43567 AC138932.2-201ENST00000548268 1459 ntBASIC13.94□□□□□ -0.18
RNF13O43567 AC126755.4-201ENST00000549796 1459 ntBASIC13.94□□□□□ -0.18
RNF13O43567 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF13O43567 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF13O43567 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF13O43567 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF13O43567 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
RNF13O43567 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF13O43567 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RNF13O43567 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms