Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
XRCC2O43543 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
XRCC2O43543 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
XRCC2O43543 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.32□□□□□ -0.28
XRCC2O43543 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
XRCC2O43543 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
XRCC2O43543 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.32□□□□□ -0.28
XRCC2O43543 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
XRCC2O43543 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
XRCC2O43543 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
XRCC2O43543 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
XRCC2O43543 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.32□□□□□ -0.28
XRCC2O43543 AC013726.1-201ENST00000563747 2285 ntBASIC13.32□□□□□ -0.28
XRCC2O43543 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
XRCC2O43543 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
XRCC2O43543 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
XRCC2O43543 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
XRCC2O43543 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
XRCC2O43543 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
XRCC2O43543 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
XRCC2O43543 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
XRCC2O43543 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
XRCC2O43543 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.32□□□□□ -0.28
XRCC2O43543 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
XRCC2O43543 AC092183.1-201ENST00000469884 875 ntBASIC13.32□□□□□ -0.28
XRCC2O43543 RNA5SP421-201ENST00000516864 134 ntBASIC13.32□□□□□ -0.28
XRCC2O43543 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.32□□□□□ -0.28
XRCC2O43543 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.32□□□□□ -0.28
XRCC2O43543 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.32□□□□□ -0.28
XRCC2O43543 TPRX2P-201ENST00000535362 881 ntBASIC13.32□□□□□ -0.28
XRCC2O43543 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.32□□□□□ -0.28
XRCC2O43543 RARRES2P5-201ENST00000564013 466 ntBASIC13.32□□□□□ -0.28
XRCC2O43543 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.32□□□□□ -0.28
XRCC2O43543 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.32□□□□□ -0.28
XRCC2O43543 AL391069.4-201ENST00000609583 481 ntBASIC13.32□□□□□ -0.28
XRCC2O43543 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
XRCC2O43543 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.32□□□□□ -0.28
XRCC2O43543 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
XRCC2O43543 REXO1L4P-201ENST00000605109 1937 ntBASIC13.32□□□□□ -0.28
XRCC2O43543 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
XRCC2O43543 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
XRCC2O43543 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
XRCC2O43543 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
XRCC2O43543 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.32□□□□□ -0.28
XRCC2O43543 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
XRCC2O43543 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
XRCC2O43543 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
XRCC2O43543 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.32□□□□□ -0.28
XRCC2O43543 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.32□□□□□ -0.28
XRCC2O43543 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
XRCC2O43543 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.32□□□□□ -0.28
XRCC2O43543 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
XRCC2O43543 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
XRCC2O43543 REXO1L2P-201ENST00000425429 2069 ntBASIC13.32□□□□□ -0.28
XRCC2O43543 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.32□□□□□ -0.28
XRCC2O43543 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.31□□□□□ -0.28
XRCC2O43543 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
XRCC2O43543 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
XRCC2O43543 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
XRCC2O43543 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
XRCC2O43543 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.31□□□□□ -0.28
XRCC2O43543 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
XRCC2O43543 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
XRCC2O43543 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
XRCC2O43543 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
XRCC2O43543 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
XRCC2O43543 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
XRCC2O43543 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
XRCC2O43543 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
XRCC2O43543 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
XRCC2O43543 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
XRCC2O43543 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
XRCC2O43543 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
XRCC2O43543 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
XRCC2O43543 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.31□□□□□ -0.28
XRCC2O43543 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
XRCC2O43543 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC13.31□□□□□ -0.28
XRCC2O43543 RPL13AP25-201ENST00000484130 612 ntBASIC13.31□□□□□ -0.28
XRCC2O43543 SPDYE18-201ENST00000510091 1050 ntBASIC13.31□□□□□ -0.28
XRCC2O43543 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.31□□□□□ -0.28
XRCC2O43543 DOC2GP-202ENST00000514950 1163 ntBASIC13.31□□□□□ -0.28
XRCC2O43543 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
XRCC2O43543 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.31□□□□□ -0.28
XRCC2O43543 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.31□□□□□ -0.28
XRCC2O43543 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.31□□□□□ -0.28
XRCC2O43543 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.31□□□□□ -0.28
XRCC2O43543 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
XRCC2O43543 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.31□□□□□ -0.28
XRCC2O43543 AC104794.3-201ENST00000566840 1248 ntBASIC13.31□□□□□ -0.28
XRCC2O43543 RRP7BP-205ENST00000566851 833 ntBASIC13.31□□□□□ -0.28
XRCC2O43543 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.31□□□□□ -0.28
XRCC2O43543 AL390955.2-201ENST00000603032 514 ntBASIC13.31□□□□□ -0.28
XRCC2O43543 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.31□□□□□ -0.28
XRCC2O43543 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
XRCC2O43543 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
XRCC2O43543 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.31□□□□□ -0.28
XRCC2O43543 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
XRCC2O43543 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
XRCC2O43543 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
XRCC2O43543 AP000845.1-201ENST00000581677 2131 ntBASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms