Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 AL109936.8-201ENST00000641772 604 ntBASIC13.29□□□□□ -0.28
PHF1O43189 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.29□□□□□ -0.28
PHF1O43189 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PHF1O43189 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.29□□□□□ -0.28
PHF1O43189 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.29□□□□□ -0.28
PHF1O43189 SNX18-202ENST00000343017 3140 ntBASIC13.29□□□□□ -0.28
PHF1O43189 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PHF1O43189 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PHF1O43189 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
PHF1O43189 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
PHF1O43189 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
PHF1O43189 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PHF1O43189 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PHF1O43189 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PHF1O43189 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PHF1O43189 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PHF1O43189 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
PHF1O43189 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
PHF1O43189 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
PHF1O43189 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PHF1O43189 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PHF1O43189 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.28□□□□□ -0.28
PHF1O43189 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.28□□□□□ -0.28
PHF1O43189 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PHF1O43189 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PHF1O43189 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PHF1O43189 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
PHF1O43189 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PHF1O43189 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.28□□□□□ -0.28
PHF1O43189 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PHF1O43189 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.28□□□□□ -0.28
PHF1O43189 AC007686.3-201ENST00000619017 3487 ntBASIC13.28□□□□□ -0.28
PHF1O43189 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.28□□□□□ -0.28
PHF1O43189 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PHF1O43189 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PHF1O43189 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
PHF1O43189 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PHF1O43189 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.28□□□□□ -0.28
PHF1O43189 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.28□□□□□ -0.28
PHF1O43189 C18orf15-201ENST00000623680 2534 ntBASIC13.28□□□□□ -0.28
PHF1O43189 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PHF1O43189 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.28□□□□□ -0.28
PHF1O43189 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
PHF1O43189 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.28□□□□□ -0.28
PHF1O43189 ACTBP11-201ENST00000436287 1126 ntBASIC13.28□□□□□ -0.28
PHF1O43189 AC245100.5-201ENST00000452108 331 ntBASIC13.28□□□□□ -0.28
PHF1O43189 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.28□□□□□ -0.28
PHF1O43189 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.28□□□□□ -0.28
PHF1O43189 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.28□□□□□ -0.28
PHF1O43189 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.28□□□□□ -0.28
PHF1O43189 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
PHF1O43189 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.28□□□□□ -0.28
PHF1O43189 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.28□□□□□ -0.28
PHF1O43189 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.28□□□□□ -0.28
PHF1O43189 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PHF1O43189 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.28□□□□□ -0.28
PHF1O43189 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.28□□□□□ -0.28
PHF1O43189 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PHF1O43189 AC134407.2-201ENST00000625089 1978 ntBASIC13.28□□□□□ -0.28
PHF1O43189 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PHF1O43189 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
PHF1O43189 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PHF1O43189 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
PHF1O43189 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PHF1O43189 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PHF1O43189 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PHF1O43189 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
PHF1O43189 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.28□□□□□ -0.28
PHF1O43189 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
PHF1O43189 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PHF1O43189 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.28□□□□□ -0.28
PHF1O43189 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PHF1O43189 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PHF1O43189 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PHF1O43189 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
PHF1O43189 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
PHF1O43189 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
PHF1O43189 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
PHF1O43189 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.27□□□□□ -0.28
PHF1O43189 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
PHF1O43189 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.27□□□□□ -0.28
PHF1O43189 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
PHF1O43189 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PHF1O43189 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PHF1O43189 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PHF1O43189 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.27□□□□□ -0.28
PHF1O43189 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
PHF1O43189 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PHF1O43189 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
PHF1O43189 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.27□□□□□ -0.28
PHF1O43189 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PHF1O43189 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PHF1O43189 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.27□□□□□ -0.29
PHF1O43189 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.27□□□□□ -0.29
PHF1O43189 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PHF1O43189 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PHF1O43189 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PHF1O43189 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
PHF1O43189 AC004987.2-201ENST00000395959 1148 ntBASIC13.27□□□□□ -0.29
PHF1O43189 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms