Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC17.42■□□□□ 0.38
CLIC4Q9Y696 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLIC4Q9Y696 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLIC4Q9Y696 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLIC4Q9Y696 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLIC4Q9Y696 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLIC4Q9Y696 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLIC4Q9Y696 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLIC4Q9Y696 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLIC4Q9Y696 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC17.41■□□□□ 0.38
CLIC4Q9Y696 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLIC4Q9Y696 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLIC4Q9Y696 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLIC4Q9Y696 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLIC4Q9Y696 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLIC4Q9Y696 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.41■□□□□ 0.38
CLIC4Q9Y696 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CLIC4Q9Y696 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLIC4Q9Y696 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLIC4Q9Y696 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLIC4Q9Y696 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CLIC4Q9Y696 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.41■□□□□ 0.38
CLIC4Q9Y696 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLIC4Q9Y696 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CLIC4Q9Y696 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLIC4Q9Y696 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLIC4Q9Y696 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLIC4Q9Y696 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CLIC4Q9Y696 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLIC4Q9Y696 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.41■□□□□ 0.38
CLIC4Q9Y696 BASP1P1-201ENST00000430708 665 ntBASIC17.41■□□□□ 0.38
CLIC4Q9Y696 UGT1A2P-201ENST00000454886 866 ntBASIC17.41■□□□□ 0.38
CLIC4Q9Y696 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.41■□□□□ 0.38
CLIC4Q9Y696 RFPL4AP1-201ENST00000530883 850 ntBASIC17.41■□□□□ 0.38
CLIC4Q9Y696 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.41■□□□□ 0.38
CLIC4Q9Y696 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.41■□□□□ 0.38
CLIC4Q9Y696 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.41■□□□□ 0.38
CLIC4Q9Y696 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.41■□□□□ 0.38
CLIC4Q9Y696 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.41■□□□□ 0.38
CLIC4Q9Y696 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CLIC4Q9Y696 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CLIC4Q9Y696 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLIC4Q9Y696 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CLIC4Q9Y696 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLIC4Q9Y696 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CLIC4Q9Y696 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC17.41■□□□□ 0.38
CLIC4Q9Y696 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC17.41■□□□□ 0.38
CLIC4Q9Y696 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC17.41■□□□□ 0.38
CLIC4Q9Y696 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLIC4Q9Y696 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CLIC4Q9Y696 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.41■□□□□ 0.38
CLIC4Q9Y696 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLIC4Q9Y696 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLIC4Q9Y696 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC17.41■□□□□ 0.38
CLIC4Q9Y696 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC17.41■□□□□ 0.38
CLIC4Q9Y696 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CLIC4Q9Y696 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC17.4■□□□□ 0.38
CLIC4Q9Y696 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLIC4Q9Y696 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLIC4Q9Y696 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC17.4■□□□□ 0.38
CLIC4Q9Y696 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CLIC4Q9Y696 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLIC4Q9Y696 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLIC4Q9Y696 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLIC4Q9Y696 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLIC4Q9Y696 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC17.4■□□□□ 0.38
CLIC4Q9Y696 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLIC4Q9Y696 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CLIC4Q9Y696 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLIC4Q9Y696 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.4■□□□□ 0.38
CLIC4Q9Y696 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLIC4Q9Y696 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.4■□□□□ 0.38
CLIC4Q9Y696 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.4■□□□□ 0.38
CLIC4Q9Y696 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.4■□□□□ 0.38
CLIC4Q9Y696 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CLIC4Q9Y696 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.4■□□□□ 0.38
CLIC4Q9Y696 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CLIC4Q9Y696 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLIC4Q9Y696 BX640514.1-201ENST00000583223 1918 ntBASIC17.4■□□□□ 0.38
CLIC4Q9Y696 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CLIC4Q9Y696 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
CLIC4Q9Y696 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC17.4■□□□□ 0.38
CLIC4Q9Y696 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLIC4Q9Y696 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLIC4Q9Y696 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLIC4Q9Y696 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLIC4Q9Y696 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLIC4Q9Y696 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CLIC4Q9Y696 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLIC4Q9Y696 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
CLIC4Q9Y696 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLIC4Q9Y696 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLIC4Q9Y696 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CLIC4Q9Y696 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
CLIC4Q9Y696 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CLIC4Q9Y696 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CLIC4Q9Y696 AC023090.2-201ENST00000625182 2110 ntBASIC17.39■□□□□ 0.38
CLIC4Q9Y696 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLIC4Q9Y696 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLIC4Q9Y696 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms