Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
HCFC2Q9Y5Z7 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HCFC2Q9Y5Z7 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
HCFC2Q9Y5Z7 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.77■□□□□ 0.12
HCFC2Q9Y5Z7 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HCFC2Q9Y5Z7 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
HCFC2Q9Y5Z7 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
HCFC2Q9Y5Z7 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HCFC2Q9Y5Z7 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HCFC2Q9Y5Z7 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
HCFC2Q9Y5Z7 KLF2P1-201ENST00000447438 1042 ntBASIC15.77■□□□□ 0.12
HCFC2Q9Y5Z7 NOC2LP1-201ENST00000450578 752 ntBASIC15.77■□□□□ 0.12
HCFC2Q9Y5Z7 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC15.77■□□□□ 0.12
HCFC2Q9Y5Z7 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HCFC2Q9Y5Z7 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
HCFC2Q9Y5Z7 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.77■□□□□ 0.12
HCFC2Q9Y5Z7 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC15.77■□□□□ 0.12
HCFC2Q9Y5Z7 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC15.77■□□□□ 0.12
HCFC2Q9Y5Z7 AC008805.1-201ENST00000590892 364 ntBASIC15.77■□□□□ 0.12
HCFC2Q9Y5Z7 IRF3-215ENST00000596822 823 ntTSL 3 BASIC15.77■□□□□ 0.12
HCFC2Q9Y5Z7 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.77■□□□□ 0.12
HCFC2Q9Y5Z7 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HCFC2Q9Y5Z7 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HCFC2Q9Y5Z7 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.77■□□□□ 0.11
HCFC2Q9Y5Z7 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HCFC2Q9Y5Z7 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HCFC2Q9Y5Z7 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
HCFC2Q9Y5Z7 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HCFC2Q9Y5Z7 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
HCFC2Q9Y5Z7 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
HCFC2Q9Y5Z7 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HCFC2Q9Y5Z7 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HCFC2Q9Y5Z7 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HCFC2Q9Y5Z7 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HCFC2Q9Y5Z7 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.77■□□□□ 0.11
HCFC2Q9Y5Z7 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.76■□□□□ 0.11
HCFC2Q9Y5Z7 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HCFC2Q9Y5Z7 AC244394.1-201ENST00000435000 1665 ntBASIC15.76■□□□□ 0.11
HCFC2Q9Y5Z7 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HCFC2Q9Y5Z7 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
HCFC2Q9Y5Z7 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HCFC2Q9Y5Z7 AL008718.2-201ENST00000609206 1313 ntBASIC15.76■□□□□ 0.11
HCFC2Q9Y5Z7 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HCFC2Q9Y5Z7 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HCFC2Q9Y5Z7 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
HCFC2Q9Y5Z7 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HCFC2Q9Y5Z7 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HCFC2Q9Y5Z7 AC012441.2-201ENST00000444843 739 ntBASIC15.76■□□□□ 0.11
HCFC2Q9Y5Z7 AC098935.1-201ENST00000446057 611 ntBASIC15.76■□□□□ 0.11
HCFC2Q9Y5Z7 WDR7-208ENST00000589935 544 ntTSL 4 BASIC15.76■□□□□ 0.11
HCFC2Q9Y5Z7 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC15.76■□□□□ 0.11
HCFC2Q9Y5Z7 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC15.76■□□□□ 0.11
HCFC2Q9Y5Z7 COX6A1P2-201ENST00000620597 330 ntBASIC15.76■□□□□ 0.11
HCFC2Q9Y5Z7 AC011491.1-203ENST00000637688 543 ntBASIC15.76■□□□□ 0.11
HCFC2Q9Y5Z7 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
HCFC2Q9Y5Z7 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HCFC2Q9Y5Z7 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HCFC2Q9Y5Z7 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.76■□□□□ 0.11
HCFC2Q9Y5Z7 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HCFC2Q9Y5Z7 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.76■□□□□ 0.11
HCFC2Q9Y5Z7 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HCFC2Q9Y5Z7 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
HCFC2Q9Y5Z7 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.76■□□□□ 0.11
HCFC2Q9Y5Z7 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HCFC2Q9Y5Z7 MBLAC2-202ENST00000514906 1936 ntBASIC15.76■□□□□ 0.11
HCFC2Q9Y5Z7 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
HCFC2Q9Y5Z7 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
HCFC2Q9Y5Z7 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HCFC2Q9Y5Z7 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
HCFC2Q9Y5Z7 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 REXO1L4P-201ENST00000605109 1937 ntBASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 RN7SKP230-201ENST00000365642 335 ntBASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 RN7SL181P-201ENST00000462921 277 ntBASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 PAM16-211ENST00000575848 518 ntTSL 3 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms