Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COL4A3BPQ9Y5P4 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
COL4A3BPQ9Y5P4 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 MIR1909-201ENST00000411312 80 ntBASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 AC012441.1-201ENST00000446669 685 ntBASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 BCRP2-202ENST00000447763 634 ntBASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 AC022210.1-201ENST00000449856 793 ntBASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 BCRP6-201ENST00000510112 632 ntBASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 BCRP7-201ENST00000511549 544 ntBASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 SAMD11P1-201ENST00000571429 661 ntBASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL4A3BPQ9Y5P4 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL4A3BPQ9Y5P4 AC012508.2-201ENST00000567613 1472 ntBASIC17.06■□□□□ 0.32
COL4A3BPQ9Y5P4 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL4A3BPQ9Y5P4 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
COL4A3BPQ9Y5P4 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.06■□□□□ 0.32
COL4A3BPQ9Y5P4 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.06■□□□□ 0.32
COL4A3BPQ9Y5P4 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.06■□□□□ 0.32
COL4A3BPQ9Y5P4 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COL4A3BPQ9Y5P4 AC134312.5-201ENST00000568031 1313 ntBASIC17.06■□□□□ 0.32
COL4A3BPQ9Y5P4 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COL4A3BPQ9Y5P4 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
COL4A3BPQ9Y5P4 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COL4A3BPQ9Y5P4 ACKR1-201ENST00000368121 1240 ntBASIC17.06■□□□□ 0.32
COL4A3BPQ9Y5P4 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL4A3BPQ9Y5P4 MIR658-201ENST00000385210 100 ntBASIC17.06■□□□□ 0.32
COL4A3BPQ9Y5P4 BOLA2P3-201ENST00000404566 256 ntBASIC17.06■□□□□ 0.32
COL4A3BPQ9Y5P4 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.06■□□□□ 0.32
COL4A3BPQ9Y5P4 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
COL4A3BPQ9Y5P4 AL355864.2-201ENST00000447420 863 ntBASIC17.06■□□□□ 0.32
COL4A3BPQ9Y5P4 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COL4A3BPQ9Y5P4 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.06■□□□□ 0.32
COL4A3BPQ9Y5P4 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL4A3BPQ9Y5P4 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.06■□□□□ 0.32
COL4A3BPQ9Y5P4 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC17.06■□□□□ 0.32
COL4A3BPQ9Y5P4 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.06■□□□□ 0.32
COL4A3BPQ9Y5P4 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COL4A3BPQ9Y5P4 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
COL4A3BPQ9Y5P4 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
COL4A3BPQ9Y5P4 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL4A3BPQ9Y5P4 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.06■□□□□ 0.32
COL4A3BPQ9Y5P4 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL4A3BPQ9Y5P4 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.06■□□□□ 0.32
COL4A3BPQ9Y5P4 LINC02228-204ENST00000642115 2962 ntBASIC17.06■□□□□ 0.32
COL4A3BPQ9Y5P4 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL4A3BPQ9Y5P4 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
COL4A3BPQ9Y5P4 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC17.06■□□□□ 0.32
COL4A3BPQ9Y5P4 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.06■□□□□ 0.32
COL4A3BPQ9Y5P4 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COL4A3BPQ9Y5P4 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC17.05■□□□□ 0.32
COL4A3BPQ9Y5P4 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.05■□□□□ 0.32
COL4A3BPQ9Y5P4 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.05■□□□□ 0.32
COL4A3BPQ9Y5P4 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL4A3BPQ9Y5P4 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
COL4A3BPQ9Y5P4 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL4A3BPQ9Y5P4 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC17.05■□□□□ 0.32
COL4A3BPQ9Y5P4 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COL4A3BPQ9Y5P4 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
COL4A3BPQ9Y5P4 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms