Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB7Q9Y5E2 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PCDHB7Q9Y5E2 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB7Q9Y5E2 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB7Q9Y5E2 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB7Q9Y5E2 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB7Q9Y5E2 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHB7Q9Y5E2 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB7Q9Y5E2 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC16.31■□□□□ 0.2
PCDHB7Q9Y5E2 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC16.31■□□□□ 0.2
PCDHB7Q9Y5E2 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB7Q9Y5E2 BNIP3P13-201ENST00000599968 566 ntBASIC16.31■□□□□ 0.2
PCDHB7Q9Y5E2 AC100757.4-201ENST00000626934 759 ntBASIC16.31■□□□□ 0.2
PCDHB7Q9Y5E2 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHB7Q9Y5E2 AC002472.3-201ENST00000640124 621 ntBASIC16.31■□□□□ 0.2
PCDHB7Q9Y5E2 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB7Q9Y5E2 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PCDHB7Q9Y5E2 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB7Q9Y5E2 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB7Q9Y5E2 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB7Q9Y5E2 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHB7Q9Y5E2 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
PCDHB7Q9Y5E2 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB7Q9Y5E2 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB7Q9Y5E2 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB7Q9Y5E2 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB7Q9Y5E2 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB7Q9Y5E2 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB7Q9Y5E2 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB7Q9Y5E2 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PCDHB7Q9Y5E2 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHB7Q9Y5E2 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB7Q9Y5E2 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB7Q9Y5E2 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB7Q9Y5E2 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PCDHB7Q9Y5E2 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB7Q9Y5E2 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB7Q9Y5E2 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB7Q9Y5E2 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB7Q9Y5E2 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PCDHB7Q9Y5E2 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB7Q9Y5E2 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB7Q9Y5E2 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDHB7Q9Y5E2 RN7SL720P-201ENST00000488178 304 ntBASIC16.3■□□□□ 0.2
PCDHB7Q9Y5E2 IMP3P2-201ENST00000489760 475 ntBASIC16.3■□□□□ 0.2
PCDHB7Q9Y5E2 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.3■□□□□ 0.2
PCDHB7Q9Y5E2 AC022217.1-201ENST00000521069 738 ntBASIC16.3■□□□□ 0.2
PCDHB7Q9Y5E2 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC16.3■□□□□ 0.2
PCDHB7Q9Y5E2 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.3■□□□□ 0.2
PCDHB7Q9Y5E2 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
PCDHB7Q9Y5E2 AC100827.2-201ENST00000563214 1194 ntBASIC16.3■□□□□ 0.2
PCDHB7Q9Y5E2 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHB7Q9Y5E2 AL358472.3-201ENST00000608147 415 ntBASIC16.3■□□□□ 0.2
PCDHB7Q9Y5E2 AL137783.1-201ENST00000623494 1896 ntBASIC16.3■□□□□ 0.2
PCDHB7Q9Y5E2 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB7Q9Y5E2 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB7Q9Y5E2 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB7Q9Y5E2 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB7Q9Y5E2 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB7Q9Y5E2 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB7Q9Y5E2 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHB7Q9Y5E2 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDHB7Q9Y5E2 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHB7Q9Y5E2 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
PCDHB7Q9Y5E2 KRT8P19-201ENST00000551916 1455 ntBASIC16.29■□□□□ 0.2
PCDHB7Q9Y5E2 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
PCDHB7Q9Y5E2 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB7Q9Y5E2 AP005117.1-202ENST00000581724 1908 ntBASIC16.29■□□□□ 0.2
PCDHB7Q9Y5E2 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDHB7Q9Y5E2 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB7Q9Y5E2 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHB7Q9Y5E2 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB7Q9Y5E2 AC004899.1-201ENST00000424687 1714 ntBASIC16.29■□□□□ 0.2
PCDHB7Q9Y5E2 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
PCDHB7Q9Y5E2 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PCDHB7Q9Y5E2 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB7Q9Y5E2 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
PCDHB7Q9Y5E2 RN7SKP175-201ENST00000408472 289 ntBASIC16.29■□□□□ 0.2
PCDHB7Q9Y5E2 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB7Q9Y5E2 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB7Q9Y5E2 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHB7Q9Y5E2 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDHB7Q9Y5E2 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PCDHB7Q9Y5E2 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PCDHB7Q9Y5E2 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB7Q9Y5E2 AC013355.1-201ENST00000562625 723 ntBASIC16.29■□□□□ 0.2
PCDHB7Q9Y5E2 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHB7Q9Y5E2 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.29■□□□□ 0.2
PCDHB7Q9Y5E2 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC16.29■□□□□ 0.2
PCDHB7Q9Y5E2 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB7Q9Y5E2 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDHB7Q9Y5E2 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PCDHB7Q9Y5E2 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB7Q9Y5E2 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
PCDHB7Q9Y5E2 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB7Q9Y5E2 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDHB7Q9Y5E2 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHB7Q9Y5E2 AL513523.2-202ENST00000427283 2040 ntBASIC16.29■□□□□ 0.2
PCDHB7Q9Y5E2 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB7Q9Y5E2 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms