Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 AP002414.2-201ENST00000591780 3365 ntBASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.14□□□□□ -0.15
NPIPA1Q9UND3 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.13□□□□□ -0.15
NPIPA1Q9UND3 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA1Q9UND3 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA1Q9UND3 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA1Q9UND3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA1Q9UND3 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
NPIPA1Q9UND3 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA1Q9UND3 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA1Q9UND3 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA1Q9UND3 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA1Q9UND3 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA1Q9UND3 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA1Q9UND3 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA1Q9UND3 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
NPIPA1Q9UND3 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.13□□□□□ -0.15
NPIPA1Q9UND3 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA1Q9UND3 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA1Q9UND3 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
NPIPA1Q9UND3 AC099336.1-201ENST00000417053 1171 ntBASIC14.13□□□□□ -0.15
NPIPA1Q9UND3 RPL7P3-201ENST00000441388 714 ntBASIC14.13□□□□□ -0.15
NPIPA1Q9UND3 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA1Q9UND3 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.13□□□□□ -0.15
NPIPA1Q9UND3 FTH1P14-201ENST00000482930 551 ntBASIC14.13□□□□□ -0.15
NPIPA1Q9UND3 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
NPIPA1Q9UND3 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.13□□□□□ -0.15
NPIPA1Q9UND3 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.13□□□□□ -0.15
NPIPA1Q9UND3 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
NPIPA1Q9UND3 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA1Q9UND3 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.13□□□□□ -0.15
NPIPA1Q9UND3 AC000095.1-201ENST00000603208 874 ntBASIC14.13□□□□□ -0.15
NPIPA1Q9UND3 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.13□□□□□ -0.15
NPIPA1Q9UND3 AC005252.2-201ENST00000624630 1141 ntBASIC14.13□□□□□ -0.15
NPIPA1Q9UND3 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA1Q9UND3 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
NPIPA1Q9UND3 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA1Q9UND3 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
NPIPA1Q9UND3 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA1Q9UND3 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA1Q9UND3 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA1Q9UND3 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.13□□□□□ -0.15
NPIPA1Q9UND3 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.13□□□□□ -0.15
NPIPA1Q9UND3 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA1Q9UND3 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA1Q9UND3 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA1Q9UND3 AC013268.4-201ENST00000637413 2228 ntBASIC14.13□□□□□ -0.15
NPIPA1Q9UND3 MSTO2P-201ENST00000314835 1709 ntBASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 AC012441.1-201ENST00000446669 685 ntBASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 CSF2RBP1-201ENST00000447905 391 ntBASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 AP001582.1-201ENST00000525856 295 ntBASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms