Protein–RNA interactions for Protein: Q9UBE8

NLK, Serine/threonine-protein kinase NLK, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLKQ9UBE8 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
NLKQ9UBE8 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NLKQ9UBE8 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NLKQ9UBE8 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.66□□□□□ -0.22
NLKQ9UBE8 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NLKQ9UBE8 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
NLKQ9UBE8 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NLKQ9UBE8 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
NLKQ9UBE8 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NLKQ9UBE8 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NLKQ9UBE8 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
NLKQ9UBE8 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NLKQ9UBE8 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
NLKQ9UBE8 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NLKQ9UBE8 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NLKQ9UBE8 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.66□□□□□ -0.22
NLKQ9UBE8 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NLKQ9UBE8 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NLKQ9UBE8 MIR346-201ENST00000362234 95 ntBASIC13.66□□□□□ -0.22
NLKQ9UBE8 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.66□□□□□ -0.22
NLKQ9UBE8 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.66□□□□□ -0.22
NLKQ9UBE8 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NLKQ9UBE8 AC245100.5-201ENST00000452108 331 ntBASIC13.66□□□□□ -0.22
NLKQ9UBE8 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.66□□□□□ -0.22
NLKQ9UBE8 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.66□□□□□ -0.22
NLKQ9UBE8 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.66□□□□□ -0.22
NLKQ9UBE8 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NLKQ9UBE8 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.66□□□□□ -0.22
NLKQ9UBE8 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.66□□□□□ -0.22
NLKQ9UBE8 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NLKQ9UBE8 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.66□□□□□ -0.22
NLKQ9UBE8 MIR4321-201ENST00000592276 80 ntBASIC13.66□□□□□ -0.22
NLKQ9UBE8 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.66□□□□□ -0.22
NLKQ9UBE8 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NLKQ9UBE8 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.66□□□□□ -0.22
NLKQ9UBE8 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NLKQ9UBE8 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NLKQ9UBE8 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
NLKQ9UBE8 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
NLKQ9UBE8 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NLKQ9UBE8 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.66□□□□□ -0.22
NLKQ9UBE8 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NLKQ9UBE8 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NLKQ9UBE8 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.66□□□□□ -0.22
NLKQ9UBE8 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
NLKQ9UBE8 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NLKQ9UBE8 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NLKQ9UBE8 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NLKQ9UBE8 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NLKQ9UBE8 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NLKQ9UBE8 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NLKQ9UBE8 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NLKQ9UBE8 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
NLKQ9UBE8 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
NLKQ9UBE8 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NLKQ9UBE8 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.65□□□□□ -0.22
NLKQ9UBE8 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.65□□□□□ -0.22
NLKQ9UBE8 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
NLKQ9UBE8 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
NLKQ9UBE8 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NLKQ9UBE8 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.65□□□□□ -0.22
NLKQ9UBE8 FOXO1B-201ENST00000504678 1527 ntBASIC13.65□□□□□ -0.22
NLKQ9UBE8 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
NLKQ9UBE8 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NLKQ9UBE8 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.65□□□□□ -0.22
NLKQ9UBE8 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NLKQ9UBE8 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NLKQ9UBE8 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NLKQ9UBE8 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.65□□□□□ -0.22
NLKQ9UBE8 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
NLKQ9UBE8 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
NLKQ9UBE8 AC092135.3-201ENST00000624151 1846 ntBASIC13.65□□□□□ -0.22
NLKQ9UBE8 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.65□□□□□ -0.22
NLKQ9UBE8 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
NLKQ9UBE8 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NLKQ9UBE8 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.65□□□□□ -0.22
NLKQ9UBE8 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NLKQ9UBE8 HLA-H-201ENST00000383620 1096 ntBASIC13.65□□□□□ -0.22
NLKQ9UBE8 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NLKQ9UBE8 AC004461.1-201ENST00000412461 403 ntBASIC13.65□□□□□ -0.22
NLKQ9UBE8 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC13.65□□□□□ -0.22
NLKQ9UBE8 KRT18P32-201ENST00000424695 1287 ntBASIC13.65□□□□□ -0.22
NLKQ9UBE8 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.65□□□□□ -0.22
NLKQ9UBE8 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.65□□□□□ -0.22
NLKQ9UBE8 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.65□□□□□ -0.22
NLKQ9UBE8 RNA5SP410-201ENST00000516285 106 ntBASIC13.65□□□□□ -0.22
NLKQ9UBE8 SLC25A39P2-201ENST00000537614 270 ntBASIC13.65□□□□□ -0.22
NLKQ9UBE8 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.65□□□□□ -0.22
NLKQ9UBE8 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.65□□□□□ -0.22
NLKQ9UBE8 AC004835.2-201ENST00000603762 682 ntBASIC13.65□□□□□ -0.22
NLKQ9UBE8 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.65□□□□□ -0.22
NLKQ9UBE8 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NLKQ9UBE8 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.65□□□□□ -0.22
NLKQ9UBE8 AC055717.3-201ENST00000622967 595 ntBASIC13.65□□□□□ -0.22
NLKQ9UBE8 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NLKQ9UBE8 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NLKQ9UBE8 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.65□□□□□ -0.22
NLKQ9UBE8 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.65□□□□□ -0.22
NLKQ9UBE8 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NLKQ9UBE8 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms