Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.04□□□□□ -0.16
LRFN1Q9P244 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
LRFN1Q9P244 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.04□□□□□ -0.16
LRFN1Q9P244 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.04□□□□□ -0.16
LRFN1Q9P244 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.04□□□□□ -0.16
LRFN1Q9P244 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRFN1Q9P244 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.04□□□□□ -0.16
LRFN1Q9P244 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
LRFN1Q9P244 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LRFN1Q9P244 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRFN1Q9P244 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRFN1Q9P244 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LRFN1Q9P244 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRFN1Q9P244 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.04□□□□□ -0.16
LRFN1Q9P244 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LRFN1Q9P244 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LRFN1Q9P244 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.03□□□□□ -0.16
LRFN1Q9P244 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRFN1Q9P244 AC105250.1-201ENST00000509378 2057 ntBASIC14.03□□□□□ -0.16
LRFN1Q9P244 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRFN1Q9P244 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
LRFN1Q9P244 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LRFN1Q9P244 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRFN1Q9P244 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRFN1Q9P244 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LRFN1Q9P244 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
LRFN1Q9P244 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
LRFN1Q9P244 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRFN1Q9P244 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRFN1Q9P244 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LRFN1Q9P244 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRFN1Q9P244 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.03□□□□□ -0.16
LRFN1Q9P244 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LRFN1Q9P244 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRFN1Q9P244 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.03□□□□□ -0.16
LRFN1Q9P244 TPM3P8-201ENST00000330554 643 ntBASIC14.03□□□□□ -0.16
LRFN1Q9P244 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRFN1Q9P244 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.03□□□□□ -0.16
LRFN1Q9P244 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.03□□□□□ -0.16
LRFN1Q9P244 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
LRFN1Q9P244 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
LRFN1Q9P244 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRFN1Q9P244 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LRFN1Q9P244 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LRFN1Q9P244 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LRFN1Q9P244 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRFN1Q9P244 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.03□□□□□ -0.16
LRFN1Q9P244 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.03□□□□□ -0.16
LRFN1Q9P244 RN7SL48P-201ENST00000579283 293 ntBASIC14.03□□□□□ -0.16
LRFN1Q9P244 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRFN1Q9P244 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LRFN1Q9P244 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.03□□□□□ -0.16
LRFN1Q9P244 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.03□□□□□ -0.16
LRFN1Q9P244 AHCYP2-201ENST00000430630 1300 ntBASIC14.03□□□□□ -0.16
LRFN1Q9P244 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.03□□□□□ -0.16
LRFN1Q9P244 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.03□□□□□ -0.16
LRFN1Q9P244 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRFN1Q9P244 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRFN1Q9P244 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRFN1Q9P244 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRFN1Q9P244 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LRFN1Q9P244 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.03□□□□□ -0.16
LRFN1Q9P244 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRFN1Q9P244 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LRFN1Q9P244 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRFN1Q9P244 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LRFN1Q9P244 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LRFN1Q9P244 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LRFN1Q9P244 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.03□□□□□ -0.16
LRFN1Q9P244 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LRFN1Q9P244 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LRFN1Q9P244 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
LRFN1Q9P244 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRFN1Q9P244 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
LRFN1Q9P244 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.02□□□□□ -0.16
LRFN1Q9P244 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRFN1Q9P244 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.02□□□□□ -0.16
LRFN1Q9P244 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.02□□□□□ -0.16
LRFN1Q9P244 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRFN1Q9P244 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.02□□□□□ -0.16
LRFN1Q9P244 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRFN1Q9P244 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRFN1Q9P244 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRFN1Q9P244 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRFN1Q9P244 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
LRFN1Q9P244 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
LRFN1Q9P244 KRT8P14-201ENST00000414254 1442 ntBASIC14.02□□□□□ -0.16
LRFN1Q9P244 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
LRFN1Q9P244 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.02□□□□□ -0.17
LRFN1Q9P244 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRFN1Q9P244 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LRFN1Q9P244 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LRFN1Q9P244 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRFN1Q9P244 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRFN1Q9P244 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.02□□□□□ -0.17
LRFN1Q9P244 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LRFN1Q9P244 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.02□□□□□ -0.17
LRFN1Q9P244 MIR1908-201ENST00000410394 80 ntBASIC14.02□□□□□ -0.17
LRFN1Q9P244 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.02□□□□□ -0.17
LRFN1Q9P244 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms