Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC1R1Q9NWW0 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
HCFC1R1Q9NWW0 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC1R1Q9NWW0 RN7SKP230-201ENST00000365642 335 ntBASIC15.69■□□□□ 0.1
HCFC1R1Q9NWW0 SLC16A6P1-201ENST00000413214 1059 ntBASIC15.69■□□□□ 0.1
HCFC1R1Q9NWW0 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC15.69■□□□□ 0.1
HCFC1R1Q9NWW0 TUBB8P8-201ENST00000458717 1058 ntBASIC15.69■□□□□ 0.1
HCFC1R1Q9NWW0 AC012618.1-201ENST00000461223 412 ntBASIC15.69■□□□□ 0.1
HCFC1R1Q9NWW0 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC1R1Q9NWW0 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC15.69■□□□□ 0.1
HCFC1R1Q9NWW0 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC15.69■□□□□ 0.1
HCFC1R1Q9NWW0 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC15.69■□□□□ 0.1
HCFC1R1Q9NWW0 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC1R1Q9NWW0 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC1R1Q9NWW0 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.69■□□□□ 0.1
HCFC1R1Q9NWW0 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
HCFC1R1Q9NWW0 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC1R1Q9NWW0 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC1R1Q9NWW0 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC1R1Q9NWW0 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC1R1Q9NWW0 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC1R1Q9NWW0 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.69■□□□□ 0.1
HCFC1R1Q9NWW0 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC1R1Q9NWW0 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC1R1Q9NWW0 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 AC026691.1-201ENST00000602502 2017 ntBASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 FXNP2-201ENST00000411625 547 ntBASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 AL008707.1-201ENST00000422498 534 ntBASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 MIR4706-201ENST00000582134 82 ntBASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 AC005324.6-201ENST00000587972 613 ntBASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 AF254983.2-201ENST00000612331 135 ntBASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 AL805961.1-203ENST00000641078 1258 ntBASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC1R1Q9NWW0 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HCFC1R1Q9NWW0 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
HCFC1R1Q9NWW0 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCFC1R1Q9NWW0 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCFC1R1Q9NWW0 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
HCFC1R1Q9NWW0 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
HCFC1R1Q9NWW0 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.67■□□□□ 0.1
HCFC1R1Q9NWW0 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCFC1R1Q9NWW0 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCFC1R1Q9NWW0 AC012508.2-201ENST00000567613 1472 ntBASIC15.67■□□□□ 0.1
HCFC1R1Q9NWW0 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCFC1R1Q9NWW0 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCFC1R1Q9NWW0 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.67■□□□□ 0.1
HCFC1R1Q9NWW0 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
HCFC1R1Q9NWW0 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
HCFC1R1Q9NWW0 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCFC1R1Q9NWW0 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HCFC1R1Q9NWW0 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HCFC1R1Q9NWW0 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms