Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BLOC1S4Q9NUP1 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
BLOC1S4Q9NUP1 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
BLOC1S4Q9NUP1 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.9■□□□□ 0.3
BLOC1S4Q9NUP1 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BLOC1S4Q9NUP1 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BLOC1S4Q9NUP1 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.9■□□□□ 0.3
BLOC1S4Q9NUP1 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BLOC1S4Q9NUP1 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BLOC1S4Q9NUP1 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BLOC1S4Q9NUP1 AC099063.4-201ENST00000641099 1602 ntBASIC16.9■□□□□ 0.3
BLOC1S4Q9NUP1 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
BLOC1S4Q9NUP1 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BLOC1S4Q9NUP1 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.9■□□□□ 0.3
BLOC1S4Q9NUP1 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BLOC1S4Q9NUP1 BAATP1-201ENST00000412284 1225 ntBASIC16.9■□□□□ 0.3
BLOC1S4Q9NUP1 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.9■□□□□ 0.3
BLOC1S4Q9NUP1 RN7SL752P-201ENST00000463779 287 ntBASIC16.9■□□□□ 0.3
BLOC1S4Q9NUP1 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.9■□□□□ 0.3
BLOC1S4Q9NUP1 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.9■□□□□ 0.3
BLOC1S4Q9NUP1 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.9■□□□□ 0.3
BLOC1S4Q9NUP1 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.9■□□□□ 0.3
BLOC1S4Q9NUP1 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.9■□□□□ 0.3
BLOC1S4Q9NUP1 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
BLOC1S4Q9NUP1 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
BLOC1S4Q9NUP1 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BLOC1S4Q9NUP1 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
BLOC1S4Q9NUP1 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.9■□□□□ 0.3
BLOC1S4Q9NUP1 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
BLOC1S4Q9NUP1 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BLOC1S4Q9NUP1 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BLOC1S4Q9NUP1 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BLOC1S4Q9NUP1 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.9■□□□□ 0.3
BLOC1S4Q9NUP1 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BLOC1S4Q9NUP1 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BLOC1S4Q9NUP1 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
BLOC1S4Q9NUP1 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
BLOC1S4Q9NUP1 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
BLOC1S4Q9NUP1 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
BLOC1S4Q9NUP1 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
BLOC1S4Q9NUP1 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BLOC1S4Q9NUP1 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BLOC1S4Q9NUP1 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BLOC1S4Q9NUP1 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.89■□□□□ 0.29
BLOC1S4Q9NUP1 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
BLOC1S4Q9NUP1 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
BLOC1S4Q9NUP1 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
BLOC1S4Q9NUP1 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.89■□□□□ 0.29
BLOC1S4Q9NUP1 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
BLOC1S4Q9NUP1 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.89■□□□□ 0.29
BLOC1S4Q9NUP1 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.89■□□□□ 0.29
BLOC1S4Q9NUP1 AL035633.1-201ENST00000406139 838 ntBASIC16.89■□□□□ 0.29
BLOC1S4Q9NUP1 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.89■□□□□ 0.29
BLOC1S4Q9NUP1 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.89■□□□□ 0.29
BLOC1S4Q9NUP1 INE1-201ENST00000456273 945 ntBASIC16.89■□□□□ 0.29
BLOC1S4Q9NUP1 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
BLOC1S4Q9NUP1 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.89■□□□□ 0.29
BLOC1S4Q9NUP1 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.89■□□□□ 0.29
BLOC1S4Q9NUP1 AC132938.2-201ENST00000579188 680 ntBASIC16.89■□□□□ 0.29
BLOC1S4Q9NUP1 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.89■□□□□ 0.29
BLOC1S4Q9NUP1 AC027307.3-201ENST00000594262 1100 ntBASIC16.89■□□□□ 0.29
BLOC1S4Q9NUP1 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
BLOC1S4Q9NUP1 AL591163.1-201ENST00000641757 987 ntBASIC16.89■□□□□ 0.29
BLOC1S4Q9NUP1 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.89■□□□□ 0.29
BLOC1S4Q9NUP1 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
BLOC1S4Q9NUP1 AC134312.5-201ENST00000568031 1313 ntBASIC16.89■□□□□ 0.29
BLOC1S4Q9NUP1 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
BLOC1S4Q9NUP1 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
BLOC1S4Q9NUP1 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BLOC1S4Q9NUP1 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
BLOC1S4Q9NUP1 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
BLOC1S4Q9NUP1 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BLOC1S4Q9NUP1 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
BLOC1S4Q9NUP1 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
BLOC1S4Q9NUP1 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BLOC1S4Q9NUP1 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.88■□□□□ 0.29
BLOC1S4Q9NUP1 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.88■□□□□ 0.29
BLOC1S4Q9NUP1 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
BLOC1S4Q9NUP1 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BLOC1S4Q9NUP1 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
BLOC1S4Q9NUP1 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
BLOC1S4Q9NUP1 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
BLOC1S4Q9NUP1 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BLOC1S4Q9NUP1 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
BLOC1S4Q9NUP1 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BLOC1S4Q9NUP1 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
BLOC1S4Q9NUP1 COX5BP8-201ENST00000416911 349 ntBASIC16.88■□□□□ 0.29
BLOC1S4Q9NUP1 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.88■□□□□ 0.29
BLOC1S4Q9NUP1 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.88■□□□□ 0.29
BLOC1S4Q9NUP1 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.88■□□□□ 0.29
BLOC1S4Q9NUP1 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.88■□□□□ 0.29
BLOC1S4Q9NUP1 KRT18P25-201ENST00000508931 1278 ntBASIC16.88■□□□□ 0.29
BLOC1S4Q9NUP1 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.88■□□□□ 0.29
BLOC1S4Q9NUP1 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
BLOC1S4Q9NUP1 AC068587.3-201ENST00000526613 355 ntBASIC16.88■□□□□ 0.29
BLOC1S4Q9NUP1 TDH-203ENST00000531764 1110 ntBASIC16.88■□□□□ 0.29
BLOC1S4Q9NUP1 IGHV3-72-202ENST00000621503 303 ntBASIC16.88■□□□□ 0.29
BLOC1S4Q9NUP1 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
BLOC1S4Q9NUP1 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BLOC1S4Q9NUP1 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms